RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
SURF1-204ENST00000495952 CNTN6Q9UQ52 1028 aa10.5□□□□□ -0.73
SURF1-204ENST00000495952 NEU2Q9Y3R4 380 aa10.5□□□□□ -0.73
SURF1-204ENST00000495952 STYXL1Q9Y6J8 313 aa10.5□□□□□ -0.73
SURF1-204ENST00000495952 ANK1P16157 1881 aa10.5□□□□□ -0.73
SURF1-204ENST00000495952 BRCA1P38398 1863 aaKnown RBP10.5□□□□□ -0.73
SURF1-204ENST00000495952 UMODL1Q5DID0 1318 aa10.5□□□□□ -0.73
SURF1-204ENST00000495952 COL4A5P29400 1685 aa10.5□□□□□ -0.73
SURF1-204ENST00000495952 TCRBV7S2A1N4TA0A589 114 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 CLDN3O15551 220 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 EXTL3O43909 919 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 ZBED4O75132 1171 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 LDHAP00338 332 aaKnown RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 DLATP10515 647 aaKnown RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 ALADP13716 330 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 EZRP15311 586 aaKnown RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 CCND2P30279 289 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 NSFP46459 744 aaKnown RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 COPS2P61201 443 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 ELF3P78545 371 aaPredicted RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 IFI35P80217 286 aaPredicted RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 C1QBPQ07021 282 aaKnown RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 SPRED3Q2MJR0 410 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 ZACNQ401N2 412 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 WDR44Q5JSH3 913 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 SPDYAQ5MJ70 313 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 LRRC38Q5VT99 294 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 RNF43Q68DV7 783 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 SLC39A4Q6P5W5 647 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 VSTM1Q6UX27 236 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 RGS9BPQ6ZS82 235 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 SV2AQ7L0J3 742 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 TAS1R2Q8TE23 839 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 POMGNT1Q8WZA1 660 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 RBM41Q96IZ5 413 aaKnown RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 IFT74Q96LB3 600 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 MAGEB18Q96M61 343 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 AGBL1Q96MI9 1066 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 PRMT1Q99873 361 aaKnown RBP10.49□□□□□ -0.73
SURF1-204ENST00000495952 ATP6V0A4Q9HBG4 840 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 PDLIM7Q9NR12 457 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 FBXO28Q9NVF7 368 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 FETUBQ9UGM5 382 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 ARL2BPQ9Y2Y0 163 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 PCDHA10Q9Y5I2 948 aa10.49□□□□□ -0.73
SURF1-204ENST00000495952 TMEM120BA0PK00 339 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 PSAPP07602 524 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 VIMP08670 466 aaKnown RBP10.48□□□□□ -0.73
SURF1-204ENST00000495952 MAP2K2P36507 400 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 AP3M2P53677 418 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 ITGA8P53708 1063 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 TAP1Q03518 808 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 GRM1Q13255 1194 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 ZNF268Q14587 947 aaPredicted RBP10.48□□□□□ -0.73
SURF1-204ENST00000495952 GALNTL6Q49A17 601 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 SLFN12LQ6IEE8 588 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 PLEKHA7Q6IQ23 1121 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 ZNF365Q70YC5 407 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 ZCCHC9Q8N567 271 aaKnown RBP10.48□□□□□ -0.73
SURF1-204ENST00000495952 DYDC1Q8WWB3 177 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 SCLT1Q96NL6 688 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 ZNF341Q9BYN7 854 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 FRMD8P1Q9BZ68 369 aaPredicted RBP10.48□□□□□ -0.73
SURF1-204ENST00000495952 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
SURF1-204ENST00000495952 NINJ2Q9NZG7 142 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 MCM8Q9UJA3 840 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 ANAPC5Q9UJX4 755 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 TPX2Q9ULW0 747 aaKnown RBP10.48□□□□□ -0.73
SURF1-204ENST00000495952 PTPN22Q9Y2R2 807 aa10.48□□□□□ -0.73
SURF1-204ENST00000495952 CLRN2A0PK11 232 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 GOLGA8IPA6NC78 632 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 GOLGA8JA6NMD2 632 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 SMAPO00193 183 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 HNRNPDLO14979 420 aaKnown RBP10.47□□□□□ -0.73
SURF1-204ENST00000495952 PRPF4O43172 522 aaKnown RBP eCLIP10.47□□□□□ -0.73
SURF1-204ENST00000495952 WFS1O76024 890 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 STBD1O95210 358 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 ATP6V1G2O95670 118 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 LSM8O95777 96 aaKnown RBP10.47□□□□□ -0.73
SURF1-204ENST00000495952 CCNE2O96020 404 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 KRT5P13647 590 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 KCNJ1P48048 391 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 RPS6P62753 249 aaKnown RBP10.47□□□□□ -0.73
SURF1-204ENST00000495952 NOMO3P69849 1222 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 IRX3P78415 501 aaPredicted RBP10.47□□□□□ -0.73
SURF1-204ENST00000495952 TNFAIP1Q13829 316 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 ZYXQ15942 572 aaKnown RBP10.47□□□□□ -0.73
SURF1-204ENST00000495952 HIBCHQ6NVY1 386 aaPredicted RBP10.47□□□□□ -0.73
SURF1-204ENST00000495952 ANO5Q75V66 913 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 SPATA21Q7Z572 469 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 ANKRD35Q8N283 1001 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 SAAL1Q96ER3 474 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 BTBD6Q96KE9 485 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 CFAP57Q96MR6 1250 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 ANKRD27Q96NW4 1050 aa10.47□□□□□ -0.73
SURF1-204ENST00000495952 CGRRF1Q99675 332 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms