RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
CLCNKA-207ENST00000495784 ZFHX2Q9C0A1 2572 aaPredicted RBP20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 H0YCG3 227 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 SYN3O14994 580 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 CLDN3O15551 220 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 ELF1P32519 619 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 NBL1P41271 181 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 ARPP19P56211 112 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 ROR1Q01973 937 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 CACNB1Q02641 598 aaPredicted RBP20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 TMEM119Q4V9L6 283 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 SEZ6Q53EL9 994 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 SLC8B1Q6J4K2 584 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 PARM1Q6UWI2 310 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 FGF14Q92915 247 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 BICD1Q96G01 975 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 HCFC1R1Q9NWW0 138 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 KCNH3Q9ULD8 1083 aa20.12■□□□□ 0.81
CLCNKA-207ENST00000495784 NPHP3-ACAD11A0A0J9YXS1 232 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 H7C4K7 107 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 PRRG1O14668 218 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 SLC26A4O43511 780 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 MCM4P33991 863 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 UBA7P41226 1012 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 SLC10A6Q3KNW5 377 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 LARP1BQ659C4 914 aaKnown RBP20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 ZNF461Q8TAF7 563 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 CALML4Q96GE6 196 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 RPP25Q9BUL9 199 aaKnown RBP20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 DNMT3BQ9UBC3 853 aaKnown RBP20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 MRPS23Q9Y3D9 190 aaKnown RBP20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 TRIP11Q15643 1979 aa20.11■□□□□ 0.81
CLCNKA-207ENST00000495784 MEFVO15553 781 aaPredicted RBP20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 LRG1P02750 347 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 GPC5P78333 572 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 MCL1Q07820 350 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 ANGPT1Q15389 498 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 PHLDB3Q6NSJ2 640 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 FRMD5Q7Z6J6 570 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 RASSF8Q8NHQ8 419 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 ODF2LQ9ULJ1 636 aa20.1■□□□□ 0.81
CLCNKA-207ENST00000495784 WDR27A2RRH5 827 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 BMP15O95972 392 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 CLTAP09496 248 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 CXCL8P10145 99 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 DHX8Q14562 1220 aaKnown RBP20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 CTXN3Q4LDR2 81 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 ARSHQ5FYA8 562 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 ASCL5Q7RTU5 278 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 HAUS6Q7Z4H7 955 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 GPBP1Q86WP2 473 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 NPAS3Q8IXF0 933 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 APPL2Q8NEU8 664 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 ING5Q8WYH8 240 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 NKD2Q969F2 451 aaPredicted RBP20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 SHDQ96IW2 340 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 SUSD3Q96L08 255 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 REEP2Q9BRK0 252 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 PLEKHA5Q9HAU0 1116 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 CYP4F11Q9HBI6 524 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 TUBGCP4Q9UGJ1 667 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 FBXL5Q9UKA1 691 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 SIT1Q9Y3P8 196 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 USP34Q70CQ2 3546 aa20.09■□□□□ 0.81
CLCNKA-207ENST00000495784 ARHGEF37A1IGU5 675 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 ABLIM3O94929 683 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 FAM13AO94988 1023 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 KRT18P05783 430 aaKnown RBP20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 RHOP08100 348 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 ATF2P15336 505 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 MARCKSP29966 332 aaPredicted RBP20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 LIG4P49917 911 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 NCKAP1LP55160 1127 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 SPECC1Q5M775 1068 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 ZNF280DQ6N043 979 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 BRAPQ7Z569 592 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 KXD1Q9BQD3 176 aa20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.08■□□□□ 0.81
CLCNKA-207ENST00000495784 DOCK6Q96HP0 2047 aa20.08■□□□□ 0.8
CLCNKA-207ENST00000495784 CITO14578 2027 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 PRR23AA6NEV1 266 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 K7ENM7 598 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 HNRNPDLO14979 420 aaKnown RBP20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 TBC1D4O60343 1298 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 DCNP07585 359 aaKnown RBP20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 PTPN2P17706 415 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 SCP2P22307 547 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 PPP2R3AQ06190 1150 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 SPAG1Q07617 926 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 MRPL58Q14197 206 aaKnown RBP20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 KYAT1Q16773 422 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 TPGS2Q68CL5 300 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 TCEAL8Q8IYN2 117 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 MYCT1Q8N699 235 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 DDX12PQ92771 950 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 KIF12Q96FN5 646 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 ZHX3Q9H4I2 956 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 PARVGQ9HBI0 331 aa20.07■□□□□ 0.8
CLCNKA-207ENST00000495784 PCDHB8Q9UN66 801 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms