RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PRRT2Q7Z6L0 340 aaPredicted RBP7.82□□□□□ -1.16
VIM-207ENST00000495528 RNF180Q86T96 592 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 SCYL3Q8IZE3 742 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 KYQ8NBH2 561 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 CHAC2Q8WUX2 184 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 CHTF18Q8WVB6 975 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 DLG3Q92796 817 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 ERCC4Q92889 916 aaPredicted RBP7.82□□□□□ -1.16
VIM-207ENST00000495528 HTATIP2Q9BUP3 242 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 PCIF1Q9H4Z3 704 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 CROTQ9UKG9 612 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 MAPRE3Q9UPY8 281 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 AFG3L2Q9Y4W6 797 aa7.82□□□□□ -1.16
VIM-207ENST00000495528 PTPRCP08575 1304 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 A0A1B0GTL3 188 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 DDTLA6NHG4 134 aaPredicted RBP7.81□□□□□ -1.16
VIM-207ENST00000495528 ENTPD3O75355 529 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 ENO2P09104 434 aaPredicted RBP7.81□□□□□ -1.16
VIM-207ENST00000495528 SLC9A1P19634 815 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 CFPP27918 469 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 PHKA1P46020 1223 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 FLT3LGP49771 235 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 ZNF174Q15697 407 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 ATP2B3Q16720 1220 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 SKIDA1Q1XH10 827 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 GADL1Q6ZQY3 521 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 FILIP1Q7Z7B0 1213 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 FAM177A1Q8N128 213 aaPredicted RBP7.81□□□□□ -1.16
VIM-207ENST00000495528 LINC00482Q8N8I6 264 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 KIAA1958Q8N8K9 716 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 OR2W6PQ8NHA6 318 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 DACT3Q96B18 629 aaPredicted RBP7.81□□□□□ -1.16
VIM-207ENST00000495528 IDI2Q9BXS1 227 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 SIL1Q9H173 461 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 CAAP1Q9H8G2 361 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 PCDH18Q9HCL0 1135 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 GNL3LQ9NVN8 582 aaKnown RBP7.81□□□□□ -1.16
VIM-207ENST00000495528 OXSMQ9NWU1 459 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.81□□□□□ -1.16
VIM-207ENST00000495528 RCAN3Q9UKA8 241 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 NR2E3Q9Y5X4 410 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 CEP290O15078 2479 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 ATRNL1Q5VV63 1379 aa7.81□□□□□ -1.16
VIM-207ENST00000495528 SALL1Q9NSC2 1324 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 DBX1A6NMT0 343 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 TNPO2O14787 897 aaKnown RBP7.8□□□□□ -1.16
VIM-207ENST00000495528 FOXP2O15409 715 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 BCAR3O75815 825 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 CIAO1O76071 339 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 TFRCP02786 760 aaKnown RBP7.8□□□□□ -1.16
VIM-207ENST00000495528 ADORA1P30542 326 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 MC4RP32245 332 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 SOX5P35711 763 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 STAT3P40763 770 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 IL2P60568 153 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 DSG1Q02413 1049 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 STRN3Q13033 797 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 STRA8Q7Z7C7 330 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 KIF18BQ86Y91 864 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 LRRC56Q8IYG6 542 aaPredicted RBP7.8□□□□□ -1.16
VIM-207ENST00000495528 HIPK4Q8NE63 616 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 TOX2Q96NM4 488 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 CLIC6Q96NY7 704 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 DEFB118Q96PH6 123 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 GBP4Q96PP9 640 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 TMEM209Q96SK2 561 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 ORAI3Q9BRQ5 295 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 DDX4Q9NQI0 724 aaKnown RBP7.8□□□□□ -1.16
VIM-207ENST00000495528 SPATA6Q9NWH7 488 aaPredicted RBP7.8□□□□□ -1.16
VIM-207ENST00000495528 UCKL1Q9NWZ5 548 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 HSPBP1Q9NZL4 362 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 DENND2AQ9ULE3 1009 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 PA2G4Q9UQ80 394 aaKnown RBP7.8□□□□□ -1.16
VIM-207ENST00000495528 SLC45A1Q9Y2W3 748 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 PRKAB1Q9Y478 270 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 LRRFIP2Q9Y608 721 aaKnown RBP7.8□□□□□ -1.16
VIM-207ENST00000495528 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
VIM-207ENST00000495528 GAKO14976 1311 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 TRIM75PA6NK02 468 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 ZNF839A8K0R7 811 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 CTNND1O60716 968 aaKnown RBP7.79□□□□□ -1.16
VIM-207ENST00000495528 THBS2P35442 1172 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 IL15P40933 162 aaPredicted RBP7.79□□□□□ -1.16
VIM-207ENST00000495528 BTDP43251 543 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 RARSP54136 660 aaKnown RBP7.79□□□□□ -1.16
VIM-207ENST00000495528 TIMM10P62072 90 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 PICALMQ13492 652 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 RTP5Q14D33 572 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 VWA3BQ502W6 1294 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 CATSPEREQ5SY80 951 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 RNF187Q5TA31 235 aaPredicted RBP7.79□□□□□ -1.16
VIM-207ENST00000495528 TCERG1LQ5VWI1 586 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 CILP2Q8IUL8 1156 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 ANKRD13CQ8N6S4 541 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 SMCR8Q8TEV9 937 aaPredicted RBP7.79□□□□□ -1.16
VIM-207ENST00000495528 ASB15Q8WXK1 588 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 PAWRQ96IZ0 340 aaKnown RBP7.79□□□□□ -1.16
VIM-207ENST00000495528 ELF4Q99607 663 aaPredicted RBP7.79□□□□□ -1.16
VIM-207ENST00000495528 SPC25Q9HBM1 224 aa7.79□□□□□ -1.16
VIM-207ENST00000495528 DLL4Q9NR61 685 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms