RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 UNGP13051 313 aaPredicted RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 PEX5P50542 639 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 CDH8P55286 799 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 TFAMQ00059 246 aaKnown RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 NCOA4Q13772 614 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 TTC27Q6P3X3 843 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 SH2D3CQ8N5H7 860 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 SLC17A8Q8NDX2 589 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 FDXACB1Q9BRP7 624 aaPredicted RBP11.14□□□□□ -0.63
SAMM50-206ENST00000494795 C11orf70Q9BRQ4 267 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 KLHL11Q9NVR0 708 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 GINS2Q9Y248 185 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 PCDHB4Q9Y5E5 795 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 MROH7Q68CQ1 1323 aa11.14□□□□□ -0.63
SAMM50-206ENST00000494795 PIGRP01833 764 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 PYGBP11216 843 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 CUL2Q13617 745 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 ZNF792Q3KQV3 632 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 KCTD16Q68DU8 428 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 FASTKD5Q7L8L6 764 aaKnown RBP11.13□□□□□ -0.63
SAMM50-206ENST00000494795 KATNBL1Q9H079 304 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 PRDM4Q9UKN5 801 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 LGALS2P05162 132 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 POU5F1Q01860 360 aaKnown RBP11.13□□□□□ -0.63
SAMM50-206ENST00000494795 CLEC16AQ2KHT3 1053 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 ATP13A4Q4VNC1 1196 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 GPRC5AQ8NFJ5 357 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 ZIM3Q96PE6 472 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 SIP14410 1827 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 C22orf31O95567 290 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 HOXC6P09630 235 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 RFX1P22670 979 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 ANXA13P27216 316 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 RFC5P40937 340 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 PSMC4P43686 418 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 GCNT1Q02742 428 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 GABPB1Q06547 395 aaPredicted RBP11.13□□□□□ -0.63
SAMM50-206ENST00000494795 SKIDA1Q1XH10 827 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 ACAD10Q6JQN1 1059 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 PRUNE1Q86TP1 453 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 TFAP2BQ92481 460 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 CD101Q93033 1021 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 ACSF2Q96CM8 615 aaPredicted RBP11.13□□□□□ -0.63
SAMM50-206ENST00000494795 PBKQ96KB5 322 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 FAM204AQ9H8W3 233 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 RRAGCQ9HB90 399 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.13□□□□□ -0.63
SAMM50-206ENST00000494795 HMGXB4Q9UGU5 601 aa11.13□□□□□ -0.63
SAMM50-206ENST00000494795 NFICP08651 508 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CCDC172P0C7W6 258 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 SMPD1P17405 629 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 RPL7AP62424 266 aaKnown RBP11.12□□□□□ -0.63
SAMM50-206ENST00000494795 MBTD1Q05BQ5 628 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 HIC1Q14526 733 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 HLTFQ14527 1009 aaKnown RBP eCLIP11.12□□□□□ -0.63
SAMM50-206ENST00000494795 IFI16Q16666 785 aaKnown RBP11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
SAMM50-206ENST00000494795 MMS22LQ6ZRQ5 1243 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 MCOLN2Q8IZK6 566 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 ANAPC7Q9UJX3 599 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 TOM1L1O75674 476 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CYP1A2P05177 515 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CLTAP09496 248 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 GJC1P36383 396 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 LMAN1P49257 510 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 MAPK6Q16659 721 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 TTMPQ5BVD1 217 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 WDR44Q5JSH3 913 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 FOXR1Q6PIV2 292 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 PRELID2Q8N945 189 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 RBBP8NLQ8NC74 664 aaPredicted RBP11.12□□□□□ -0.63
SAMM50-206ENST00000494795 ATG4AQ8WYN0 398 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 C16orf70Q9BSU1 422 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 TMEM134Q9H6X4 195 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 PTPRHQ9HD43 1115 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CPSF3Q9UKF6 684 aaKnown RBP11.12□□□□□ -0.63
SAMM50-206ENST00000494795 PTPN22Q9Y2R2 807 aa11.12□□□□□ -0.63
SAMM50-206ENST00000494795 CELF2O95319 508 aaKnown RBP11.11□□□□□ -0.63
SAMM50-206ENST00000494795 SCP2P22307 547 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 GNA15P30679 374 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 GTF2H1P32780 548 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 TUBB4BP68371 445 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 TTLL4Q14679 1199 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 UAP1Q16222 522 aaPredicted RBP11.11□□□□□ -0.63
SAMM50-206ENST00000494795 ZNF568Q3ZCX4 644 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 IER5Q5VY09 327 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 SYCE1Q8N0S2 351 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 LMBR1Q8WVP7 490 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 MRPL4Q9BYD3 311 aaKnown RBP11.11□□□□□ -0.63
SAMM50-206ENST00000494795 FAM117AQ9C073 453 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 CDT1Q9H211 546 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 MROH8Q9H579 483 aa11.11□□□□□ -0.63
SAMM50-206ENST00000494795 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.11□□□□□ -0.63
SAMM50-206ENST00000494795 FLRT1Q9NZU1 646 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms