RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 VARS2Q5ST30 1063 aaKnown RBP18.17■□□□□ 0.5
PTPRU-208ENST00000493601 SLC8B1Q6J4K2 584 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 PHLDB3Q6NSJ2 640 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 PARM1Q6UWI2 310 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 RSPO2Q6UXX9 243 aaPredicted RBP18.17■□□□□ 0.5
PTPRU-208ENST00000493601 ZPBP2Q6X784 338 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 FRMD5Q7Z6J6 570 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 FGF14Q92915 247 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 NUB1Q9Y5A7 615 aa18.17■□□□□ 0.5
PTPRU-208ENST00000493601 NOTCH4Q99466 2003 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 H7C4K7 107 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 SLC26A4O43511 780 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 PLA2G4BP0C869 781 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 MCM2P49736 904 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 ROR1Q01973 937 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 TMEM119Q4V9L6 283 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 ZNF461Q8TAF7 563 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 ITFG1Q8TB96 612 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 NKD2Q969F2 451 aaPredicted RBP18.16■□□□□ 0.5
PTPRU-208ENST00000493601 C18orf25Q96B23 403 aaPredicted RBP18.16■□□□□ 0.5
PTPRU-208ENST00000493601 SHDQ96IW2 340 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 AK8Q96MA6 479 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 PLIN2Q99541 437 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 HCFC1R1Q9NWW0 138 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 LARSQ9P2J5 1176 aaKnown RBP18.16■□□□□ 0.5
PTPRU-208ENST00000493601 DMDP11532 3685 aa18.16■□□□□ 0.5
PTPRU-208ENST00000493601 MIA3Q5JRA6 1907 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 PRRG1O14668 218 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 CLDN3O15551 220 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 LRG1P02750 347 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 ELF1P32519 619 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPRU-208ENST00000493601 MCL1Q07820 350 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 ASCL5Q7RTU5 278 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 NPAS3Q8IXF0 933 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 ST13P5Q8NFI4 369 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-208ENST00000493601 BICD1Q96G01 975 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 ZBTB45Q96K62 511 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-208ENST00000493601 DNMT3BQ9UBC3 853 aaKnown RBP18.15■□□□□ 0.5
PTPRU-208ENST00000493601 ODF2LQ9ULJ1 636 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 SMC3Q9UQE7 1217 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 SIT1Q9Y3P8 196 aa18.15■□□□□ 0.5
PTPRU-208ENST00000493601 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.15■□□□□ 0.5
PTPRU-208ENST00000493601 ARHGEF37A1IGU5 675 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 WDR27A2RRH5 827 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 MEFVO15553 781 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-208ENST00000493601 ABLIM3O94929 683 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
PTPRU-208ENST00000493601 RHOP08100 348 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 SCP2P22307 547 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 MCM4P33991 863 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 SLC10A6Q3KNW5 377 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 ZNF280DQ6N043 979 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 APPL2Q8NEU8 664 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 CALML4Q96GE6 196 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 SUSD3Q96L08 255 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 RPP25Q9BUL9 199 aaKnown RBP18.14■□□□□ 0.49
PTPRU-208ENST00000493601 PLEKHA5Q9HAU0 1116 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 AVENQ9NQS1 362 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-208ENST00000493601 GDE1Q9NZC3 331 aa18.14■□□□□ 0.49
PTPRU-208ENST00000493601 MRPS23Q9Y3D9 190 aaKnown RBP18.14■□□□□ 0.49
PTPRU-208ENST00000493601 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.14■□□□□ 0.49
PTPRU-208ENST00000493601 TBC1D4O60343 1298 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 BMP15O95972 392 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 CXCL8P10145 99 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 ATF2P15336 505 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 UBA7P41226 1012 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 NCKAP1LP55160 1127 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 ARPP19P56211 112 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 STARD6P59095 220 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 GPC5P78333 572 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 PFKPQ01813 784 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 MRPL58Q14197 206 aaKnown RBP18.13■□□□□ 0.49
PTPRU-208ENST00000493601 KYAT1Q16773 422 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 CTXN3Q4LDR2 81 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 SEZ6Q53EL9 994 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 TPGS2Q68CL5 300 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 TCEAL8Q8IYN2 117 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 PJA1Q8NG27 643 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 ING5Q8WYH8 240 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 KCNN1Q92952 543 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 KXD1Q9BQD3 176 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 TUBGCP4Q9UGJ1 667 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 WDR87Q6ZQQ6 2873 aa18.13■□□□□ 0.49
PTPRU-208ENST00000493601 NPHP3-ACAD11A0A0J9YXS1 232 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 HNRNPDLO14979 420 aaKnown RBP18.12■□□□□ 0.49
PTPRU-208ENST00000493601 DCNP07585 359 aaKnown RBP18.12■□□□□ 0.49
PTPRU-208ENST00000493601 CLTAP09496 248 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 PTPN2P17706 415 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 LIG4P49917 911 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
PTPRU-208ENST00000493601 ARSHQ5FYA8 562 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 SPECC1Q5M775 1068 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 HAUS6Q7Z4H7 955 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 BRAPQ7Z569 592 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 GPBP1Q86WP2 473 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 REEP2Q9BRK0 252 aa18.12■□□□□ 0.49
PTPRU-208ENST00000493601 CYP4F11Q9HBI6 524 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms