RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MPZL3Q6UWV2 235 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 FRMD5Q7Z6J6 570 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 GPBP1Q86WP2 473 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 HS6ST3Q8IZP7 471 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 PLCD3Q8N3E9 789 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 TTC9BQ8N6N2 239 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 FGF13Q92913 245 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 MCRS1Q96EZ8 462 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 EPSTI1Q96J88 318 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 CLIC6Q96NY7 704 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 TMEM209Q96SK2 561 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 FGFBP2Q9BYJ0 223 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 CRISPLD1Q9H336 500 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 ZHX3Q9H4I2 956 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 TMEM134Q9H6X4 195 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 SSX2IPQ9Y2D8 614 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 MTF2Q9Y483 593 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-211ENST00000491581 TCHHQ07283 1943 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 MIA3Q5JRA6 1907 aa9.75□□□□□ -0.85
HDAC3-211ENST00000491581 SCN1AP35498 2009 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 TULP1O00294 542 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-211ENST00000491581 STK25O00506 426 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-211ENST00000491581 FAM189A1O60320 539 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 SOAT2O75908 522 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 CEBPBP17676 345 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 MUTP22033 750 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 GUCY2CP25092 1073 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 MATR3P43243 847 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC3-211ENST00000491581 RAB33AQ14088 237 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 RILPL1Q5EBL4 403 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 DCLRE1AQ6PJP8 1040 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-211ENST00000491581 HAUS6Q7Z4H7 955 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 DRC1Q96MC2 740 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 ZSWIM3Q96MP5 696 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 ACAP3Q96P50 834 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 PGLYRP2Q96PD5 576 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 FIZ1Q96SL8 496 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 CCDC94Q9BW85 323 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-211ENST00000491581 PANK2Q9BZ23 570 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 PLEKHA4Q9H4M7 779 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC3-211ENST00000491581 ZDHHC7Q9NXF8 308 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 TBC1D7Q9P0N9 293 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 CNTN3Q9P232 1028 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 EPS15L1Q9UBC2 864 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 ZMYM2Q9UBW7 1377 aa9.74□□□□□ -0.85
HDAC3-211ENST00000491581 A0A087X0B3 334 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 LACTBL1A8MY62 500 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 ANHXE9PGG2 379 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 TMEM189-UBE2V1I3L0A0 370 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 K7ENM7 598 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 LAD1O00515 517 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 SPTLC1O15269 473 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 TBC1D4O60343 1298 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 GFRA3O60609 400 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 PAPLNO95428 1278 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 MCF2P10911 925 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 AOC1P19801 751 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 HOXC13P31276 330 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 MCM4P33991 863 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 YARSP54577 528 aaKnown RBP9.73□□□□□ -0.85
HDAC3-211ENST00000491581 NCKAP1LP55160 1127 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 KCNA1Q09470 495 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 RESTQ13127 1097 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 SNW1Q13573 536 aaKnown RBP9.73□□□□□ -0.85
HDAC3-211ENST00000491581 NOLC1Q14978 699 aaKnown RBP eCLIP9.73□□□□□ -0.85
HDAC3-211ENST00000491581 PTPAQ15257 358 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 ENOX2Q16206 610 aaKnown RBP9.73□□□□□ -0.85
HDAC3-211ENST00000491581 LIN9Q5TKA1 542 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 FOXD4L5Q5VV16 416 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-211ENST00000491581 RNF19BQ6ZMZ0 732 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 DYMQ7RTS9 669 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 NPAS3Q8IXF0 933 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 MYCT1Q8N699 235 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 STKLD1Q8NE28 680 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 FOXD4L4Q8WXT5 416 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-211ENST00000491581 STAMQ92783 540 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 BICD1Q96G01 975 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 CDK5RAP3Q96JB5 506 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 CORO1BQ9BR76 489 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 NTPCRQ9BSD7 190 aaKnown RBP9.73□□□□□ -0.85
HDAC3-211ENST00000491581 RAB34Q9BZG1 259 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 TBC1D17Q9HA65 648 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 FBXL5Q9UKA1 691 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 R4GN57 208 aa9.73□□□□□ -0.85
HDAC3-211ENST00000491581 ZDBF2Q9HCK1 2354 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 SHISA7A6NL88 538 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 MOSPD3O75425 235 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 TOM1L1O75674 476 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 RHOP08100 348 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 NFICP08651 508 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 SRFP11831 508 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 KCNE1P15382 129 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 ACOT2P49753 483 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 CASP5P51878 434 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 MCL1Q07820 350 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms