RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 STK38Q15208 465 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 AXDND1Q5T1B0 1012 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 ZNF280DQ6N043 979 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 STXBP4Q6ZWJ1 553 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 BEST2Q8NFU1 509 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 KCNN1Q92952 543 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 HVCN1Q96D96 273 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 ZBTB45Q96K62 511 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 KCNK12Q9HB15 430 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 GOLGA2P5Q9HBQ8 144 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 MAFFQ9ULX9 164 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 REV3LO60673 3130 aa18.04■□□□□ 0.48
PDLIM2-217ENST00000491330 AVPR2P30518 371 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 STAT6P42226 847 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 BRCC3P46736 316 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 ZNF131P52739 623 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 RESTQ13127 1097 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 DSTYKQ6XUX3 929 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 GET4Q7L5D6 327 aaPredicted RBP18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 ZNF461Q8TAF7 563 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 SLC7A14Q8TBB6 771 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 FAM212AQ96EL1 285 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 ASIC4Q96FT7 647 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 EPS15L1Q9UBC2 864 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 MTMR6Q9Y217 621 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 PCDHB13Q9Y5F0 798 aa18.03■□□□□ 0.48
PDLIM2-217ENST00000491330 PIGRP01833 764 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 POU2F2P09086 479 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 LAMP2P13473 410 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 TKTP29401 623 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 ARPP19P56211 112 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 AMPD3Q01432 767 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 SLC39A14Q15043 492 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 SLC10A6Q3KNW5 377 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 CTXN3Q4LDR2 81 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 VARS2Q5ST30 1063 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 TPGS2Q68CL5 300 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 ATL3Q6DD88 541 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 ADALQ6DHV7 355 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 IQCEQ6IPM2 695 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 MTSS1LQ765P7 747 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 GRASPQ7Z6J2 395 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 EPSTI1Q96J88 318 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 MRPL44Q9H9J2 332 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 BLOC1S4Q9NUP1 217 aa18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 R3HCC1Q9Y3T6 440 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-217ENST00000491330 MYH15Q9Y2K3 1946 aa18.02■□□□□ 0.47
PDLIM2-217ENST00000491330 TULP1O00294 542 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 PAPLNO95428 1278 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 CXCL8P10145 99 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 IDEP14735 1019 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 GTF2BQ00403 316 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 ALCAMQ13740 583 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 SLC8B1Q6J4K2 584 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 DYMQ7RTS9 669 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 SYCP3Q8IZU3 236 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 ZNF707Q96C28 371 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 SUSD3Q96L08 255 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 ZMAT2Q96NC0 199 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 ST6GALNAC4Q9H4F1 302 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 FBXO2Q9UK22 296 aaPredicted RBP18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 KCNH3Q9ULD8 1083 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 PCDHB8Q9UN66 801 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 DUSP12Q9UNI6 340 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 DERAQ9Y315 318 aa18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 TDRD15B5MCY1 1934 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-217ENST00000491330 A0A0B4J269 797 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 ABLIM1O14639 778 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 ZNF197O14709 1029 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 CCL16O15467 120 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 LDHAP00338 332 aaKnown RBP18■□□□□ 0.47
PDLIM2-217ENST00000491330 CPB1P15086 417 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 PTPN2P17706 415 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 POU5F1Q01860 360 aaKnown RBP18■□□□□ 0.47
PDLIM2-217ENST00000491330 YWHAHQ04917 246 aaPredicted RBP18■□□□□ 0.47
PDLIM2-217ENST00000491330 PTPAQ15257 358 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 PABPC1LQ4VXU2 614 aaKnown RBP18■□□□□ 0.47
PDLIM2-217ENST00000491330 SEZ6Q53EL9 994 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 SPECC1Q5M775 1068 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 ARMCX5Q6P1M9 558 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 MAP4K3Q8IVH8 894 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 CCDC65Q8IXS2 484 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 FLCNQ8NFG4 579 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 POMGNT1Q8WZA1 660 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 DDX12PQ92771 950 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 C18orf25Q96B23 403 aaPredicted RBP18■□□□□ 0.47
PDLIM2-217ENST00000491330 ACCSQ96QU6 501 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 RTP3Q9BQQ7 232 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 CXCL16Q9H2A7 254 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 ASB7Q9H672 318 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 CYP4F11Q9HBI6 524 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 WNT16Q9UBV4 365 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 CDH7Q9ULB5 785 aa18■□□□□ 0.47
PDLIM2-217ENST00000491330 TTC26A0AVF1 554 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 I3L4J1 428 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 ATF2P15336 505 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 LRPAP1P30533 357 aa17.99■□□□□ 0.47
PDLIM2-217ENST00000491330 CLCN5P51795 746 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms