RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 TDP2O95551 362 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 TDGF1P13385 188 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 GNA11P29992 359 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 MAGEA9P43362 315 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 RPS9P46781 194 aaKnown RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 ADCY1Q08828 1119 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 DMWDQ09019 674 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 ADCK5Q3MIX3 580 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 N4BP2L1Q5TBK1 243 aaPredicted RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 LIN9Q5TKA1 542 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 LAIR1Q6GTX8 287 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 TANGO2Q6ICL3 276 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 B3GNT9Q6UX72 402 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 RSPO2Q6UXX9 243 aaPredicted RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 SRGAP1Q7Z6B7 1085 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 CDR2LQ86X02 465 aaPredicted RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 RNF149Q8NC42 400 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 CNNM3Q8NE01 707 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 LNX1Q8TBB1 728 aaPredicted RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 SLC7A14Q8TBB6 771 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 NETO1Q8TDF5 533 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 SLC7A3Q8WY07 619 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 TMX3Q96JJ7 454 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 CEP170P1Q96L14 293 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 NXF3Q9H4D5 531 aaKnown RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 SEMA4GQ9NTN9 838 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 WRAP73Q9P2S5 460 aaPredicted RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 DNMT3BQ9UBC3 853 aaKnown RBP7.23□□□□□ -1.25
PBX3-208ENST00000491160 RAB23Q9ULC3 237 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 TICRRQ7Z2Z1 1910 aa7.23□□□□□ -1.25
PBX3-208ENST00000491160 SPAG17Q6Q759 2223 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 INO80B-WBP1J3KQ70 363 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 ZBTB39O15060 712 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 XYLBO75191 536 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 ERLIN2O94905 339 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 BAG4O95429 457 aaKnown RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 C1RP00736 705 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 RETP07949 1114 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 HNRNPA1P09651 372 aaKnown RBP eCLIP7.22□□□□□ -1.25
PBX3-208ENST00000491160 CPA1P15085 419 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 HOXC13P31276 330 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 USP11P51784 963 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 PSMC5P62195 406 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 SIM2Q14190 667 aaPredicted RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 GRM2Q14416 872 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 CCDC6Q16204 474 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 PSMD5Q16401 504 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 SLC5A9Q2M3M2 681 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 Q4G0T1 1027 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 PABPC1LQ4VXU2 614 aaKnown RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 AXDND1Q5T1B0 1012 aaPredicted RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 FAM171A1Q5VUB5 890 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 PRR23CQ6ZRP0 262 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 DHX32Q7L7V1 743 aaKnown RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 CELF5Q8N6W0 485 aaKnown RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 RDM1Q8NG50 284 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 TBCKQ8TEA7 893 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 CCDC12Q8WUD4 166 aaPredicted RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 PSPC1Q8WXF1 523 aaKnown RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 INTS4Q96HW7 963 aaKnown RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 NELL2Q99435 816 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 JPH2Q9BR39 696 aaPredicted RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 TTPALQ9BTX7 342 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 FAM126AQ9BYI3 521 aaPredicted RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 TRIM6Q9C030 488 aaPredicted RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 CSRNP2Q9H175 543 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 CXCL16Q9H2A7 254 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 LMAN1LQ9HAT1 526 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 SH2B1Q9NRF2 756 aaPredicted RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 VPS54Q9P1Q0 977 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 PARP2Q9UGN5 583 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 ANGPTL2Q9UKU9 493 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 MRPS23Q9Y3D9 190 aaKnown RBP7.22□□□□□ -1.25
PBX3-208ENST00000491160 SNX14Q9Y5W7 946 aa7.22□□□□□ -1.25
PBX3-208ENST00000491160 ASH1LQ9NR48 2969 aaKnown RBP7.21□□□□□ -1.25
PBX3-208ENST00000491160 TRIP11Q15643 1979 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 CASTOR2A6NHX0 329 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 CHURC1-FNTBB4DL54 471 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 B4GALT5O43286 388 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 PRPF3O43395 683 aaKnown RBP7.21□□□□□ -1.26
PBX3-208ENST00000491160 ECI2O75521 394 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 KIF4AO95239 1232 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 NPTXRO95502 500 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 CEBPBP17676 345 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 ARF4P18085 180 aaPredicted RBP7.21□□□□□ -1.26
PBX3-208ENST00000491160 IGFBP6P24592 240 aaPredicted RBP7.21□□□□□ -1.26
PBX3-208ENST00000491160 OR1D2P34982 312 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 GMPRP36959 345 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 QARSP47897 775 aaKnown RBP7.21□□□□□ -1.26
PBX3-208ENST00000491160 FNTBP49356 437 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 NRLP54845 237 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 USP46P62068 366 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 SATB1Q01826 763 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 CREMQ03060 361 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 CUL4AQ13619 759 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 HSP90AA2PQ14568 343 aaPredicted RBP7.21□□□□□ -1.26
PBX3-208ENST00000491160 CSRP2Q16527 193 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 AMHR2Q16671 573 aa7.21□□□□□ -1.26
PBX3-208ENST00000491160 RNF20Q5VTR2 975 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms