RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 DNMT3BQ9UBC3 853 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 PCDHA6Q9UN73 950 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 PIN4Q9Y237 131 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 PCDHB2Q9Y5E7 798 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 PCDHA8Q9Y5H6 950 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 COL6A6A6NMZ7 2263 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 CNTNAP2Q9UHC6 1331 aa8.03□□□□□ -1.12
PDLIM1-203ENST00000490391 PDCD11Q14690 1871 aaKnown RBP8.02□□□□□ -1.12
PDLIM1-203ENST00000490391 CFAP99D6REC4 459 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 DDX39AO00148 427 aaKnown RBP8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 CDX4O14627 284 aaPredicted RBP8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 RPP40O75818 363 aaKnown RBP8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 TMOD1P28289 359 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 GRM2Q14416 872 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 USP41Q3LFD5 358 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 PLK5Q496M5 336 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 PABPC1LQ4VXU2 614 aaKnown RBP8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 RTP2Q5QGT7 225 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 LIN9Q5TKA1 542 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 DAB2IPQ5VWQ8 1189 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 LARP1BQ659C4 914 aaKnown RBP8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 FUT10Q6P4F1 479 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 ACDQ96AP0 544 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 PGBD4Q96DM1 585 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 MCRS1Q96EZ8 462 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 CLSTN3Q9BQT9 956 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 KRTAP9-9Q9BYP9 154 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 KRTAP9-4Q9BYQ2 154 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 PSTPIP2Q9H939 334 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 KANSL3Q9P2N6 904 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 CEP131Q9UPN4 1083 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 PI4KAP42356 2102 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 NCANO14594 1321 aa8.02□□□□□ -1.13
PDLIM1-203ENST00000490391 VWA8A3KMH1 1905 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 TDRD15B5MCY1 1934 aaKnown RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 LRRK2Q5S007 2527 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 A0A087WZ62 844 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 CCDC163A0A0D9SF12 145 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 SPDYE3A6NKU9 549 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 ZNF862O60290 1169 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 XYLBO75191 536 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 AKAP3O75969 853 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 PRB1P04280 392 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 PLA2G2AP14555 144 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 CEBPBP17676 345 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 SFPQP23246 707 aaKnown RBP eCLIP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 CCNE1P24864 410 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 KIF5BP33176 963 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 OR1G1P47890 313 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 MLLT6P55198 1093 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 FGD1P98174 961 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 PPM1LQ5SGD2 360 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 UBXN11Q5T124 520 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 MIS18BP1Q6P0N0 1132 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 PRSS55Q6UWB4 352 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 TRMT1LQ7Z2T5 733 aaKnown RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 TICAM2Q86XR7 235 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 CKAP2LQ8IYA6 745 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 KRI1Q8N9T8 703 aaKnown RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 ARMC2Q8NEN0 867 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 DEFB124Q8NES8 71 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 SCLT1Q96NL6 688 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 FAM193BQ96PV7 902 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 FDXACB1Q9BRP7 624 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 GCOM2Q9BZD3 368 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 KRT23Q9C075 422 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 AVENQ9NQS1 362 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 POLIQ9UNA4 740 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 MRPS23Q9Y3D9 190 aaKnown RBP8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 ATG2BQ96BY7 2078 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 SHROOM3Q8TF72 1996 aa8.01□□□□□ -1.13
PDLIM1-203ENST00000490391 PLXNB3Q9ULL4 1909 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 BCLAF3A2AJT9 711 aaKnown RBP8□□□□□ -1.13
PDLIM1-203ENST00000490391 EIF4E1BA6NMX2 242 aaKnown RBP8□□□□□ -1.13
PDLIM1-203ENST00000490391 ADAM12O43184 909 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 EXTL3O43909 919 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 PXNP49023 591 aaPredicted RBP8□□□□□ -1.13
PDLIM1-203ENST00000490391 CREMQ03060 361 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 C19orf57Q0VDD7 668 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 SCAPQ12770 1279 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 CCINQ13939 588 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 LRRC32Q14392 662 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 FAM78AQ5JUQ0 283 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 PKN3Q6P5Z2 889 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 VITQ6UXI7 678 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 SMG8Q8ND04 991 aaKnown RBP8□□□□□ -1.13
PDLIM1-203ENST00000490391 SLC7A14Q8TBB6 771 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 RRP36Q96EU6 259 aaKnown RBP8□□□□□ -1.13
PDLIM1-203ENST00000490391 CEP89Q96ST8 783 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 TRMT61BQ9BVS5 477 aaKnown RBP8□□□□□ -1.13
PDLIM1-203ENST00000490391 DUSP15Q9H1R2 295 aaPredicted RBP8□□□□□ -1.13
PDLIM1-203ENST00000490391 CNNM2Q9H8M5 875 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 TMEM9BQ9NQ34 198 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 AGPAT5Q9NUQ2 364 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 MIOSQ9NXC5 875 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 PCDHB15Q9Y5E8 787 aa8□□□□□ -1.13
PDLIM1-203ENST00000490391 GOLGA4Q13439 2230 aaKnown RBP7.99□□□□□ -1.13
PDLIM1-203ENST00000490391 IGLV3-22A0A075B6J6 115 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms