RNA–Protein interactions for RNA: ENST00000489198.1

MSRB1-204, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3

Gene MSRB1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-204ENST00000489198 KANK3Q6NY19 840 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 CCDC149Q6ZUS6 474 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 CEP57Q86XR8 500 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 KREMEN2Q8NCW0 462 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 MSTO1Q9BUK6 570 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 UBQLN1Q9UMX0 589 aaKnown RBP13.2□□□□□ -0.3
MSRB1-204ENST00000489198 DERAQ9Y315 318 aa13.2□□□□□ -0.3
MSRB1-204ENST00000489198 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 CITO14578 2027 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 CCDC195A0A1B0GUA6 201 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 LACTBL1A8MY62 500 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 XPOTO43592 962 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 TBC1D4O60343 1298 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 ZMYND10O75800 440 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 HNRNPA1P09651 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 PAX3P23760 479 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 TKTP29401 623 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 TNFSF9P41273 254 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 AARSP49588 968 aaKnown RBP eCLIP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 ZXDAP98168 799 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 MRPL58Q14197 206 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 POSTNQ15063 836 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 ZBTB41Q5SVQ8 909 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 L1TD1Q5T7N2 865 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 SLC8B1Q6J4K2 584 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 PDILTQ8N807 584 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 SUSD3Q96L08 255 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 PANK2Q9BZ23 570 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 ASB7Q9H672 318 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 MRPL44Q9H9J2 332 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 TUBGCP4Q9UGJ1 667 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 RCOR1Q9UKL0 485 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
MSRB1-204ENST00000489198 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
MSRB1-204ENST00000489198 TECTAO75443 2155 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 FAM86C2PA6NEL3 165 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 M0QZQ0 153 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 ADAM12O43184 909 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 RFPL2O75678 378 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 COL9A1P20849 921 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 ADSSP30520 456 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 BRCC3P46736 316 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 AMPD3Q01432 767 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 UVSSAQ2YD98 709 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 FOXD4L5Q5VV16 416 aaPredicted RBP13.18□□□□□ -0.3
MSRB1-204ENST00000489198 SPATA1Q5VX52 437 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 RESP18Q5W5W9 173 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 BMP8AQ7Z5Y6 402 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 FOXD4L4Q8WXT5 416 aaPredicted RBP13.18□□□□□ -0.3
MSRB1-204ENST00000489198 STAMQ92783 540 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 ACSF2Q96CM8 615 aaPredicted RBP13.18□□□□□ -0.3
MSRB1-204ENST00000489198 KIF12Q96FN5 646 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 TRIM9Q9C026 710 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 AGO2Q9UKV8 859 aaKnown RBP13.18□□□□□ -0.3
MSRB1-204ENST00000489198 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 C2CD2Q9Y426 696 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 NUB1Q9Y5A7 615 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 PLXNA3P51805 1871 aa13.18□□□□□ -0.3
MSRB1-204ENST00000489198 VWA8A3KMH1 1905 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 CLUHO75153 1309 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 H7C4K7 107 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 I3L4J1 428 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 SPATA31D3P0C874 917 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 IDEP14735 1019 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 OR1D2P34982 312 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 ME1P48163 572 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 CASP5P51878 434 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
MSRB1-204ENST00000489198 KCNA1Q09470 495 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
MSRB1-204ENST00000489198 LIN9Q5TKA1 542 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 RSPO2Q6UXX9 243 aaPredicted RBP13.17□□□□□ -0.3
MSRB1-204ENST00000489198 TRIM67Q6ZTA4 783 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 SPATA31D4Q6ZUB0 917 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
MSRB1-204ENST00000489198 UBALD2Q8IYN6 164 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms