RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SGSM1Q2NKQ1 1148 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 LRRC8DQ7L1W4 858 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 FAM126BQ8IXS8 530 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 BEST2Q8NFU1 509 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 TAF4BQ92750 862 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 TSPAN18Q96SJ8 248 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 NIF3L1Q9GZT8 377 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 AGO3Q9H9G7 860 aaKnown RBP10.78□□□□□ -0.68
USP11-211ENST00000489111 LUC7LQ9NQ29 371 aaKnown RBP10.78□□□□□ -0.68
USP11-211ENST00000489111 KCND1Q9NSA2 647 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 FAM105AQ9NUU6 356 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 SPTLC3Q9NUV7 552 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 CNTN3Q9P232 1028 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 ARHGAP20Q9P2F6 1191 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 ITGA11Q9UKX5 1188 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 PCDHB2Q9Y5E7 798 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 EPN1Q9Y6I3 576 aaPredicted RBP10.78□□□□□ -0.68
USP11-211ENST00000489111 HTTP42858 3142 aa10.78□□□□□ -0.68
USP11-211ENST00000489111 DCDC2CA8MYV0 355 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 EIF3CLB5ME19 914 aaKnown RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 MEFVO15553 781 aaPredicted RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 EVI5O60447 810 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 ASS1P00966 412 aaKnown RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 ITGB3P05106 788 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 PLEKP08567 350 aaPredicted RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 PNMA6AP0CW24 399 aaPredicted RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 SKIP12755 728 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 ITGA4P13612 1032 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 KRT5P13647 590 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 AKAP5P24588 427 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 PRKCIP41743 596 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 RBP5P82980 135 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 CUL2Q13617 745 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 HGSNATQ68CP4 663 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 SPOPLQ6IQ16 392 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 KIAA1328Q86T90 577 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 TXLNBQ8N3L3 684 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 C1orf127Q8N9H9 656 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 SMG8Q8ND04 991 aaKnown RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 ACRBPQ8NEB7 543 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 HELQQ8TDG4 1101 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 SHC3Q92529 594 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 KAT5Q92993 513 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 TATDN2Q93075 761 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 PPP1R13BQ96KQ4 1090 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 KREMEN1Q96MU8 473 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 RPS6KC1Q96S38 1066 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 EIF3CQ99613 913 aaKnown RBP10.77□□□□□ -0.69
USP11-211ENST00000489111 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.77□□□□□ -0.69
USP11-211ENST00000489111 HAUS4Q9H6D7 363 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 DPP3Q9NY33 737 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 ADGRG1Q9Y653 693 aa10.77□□□□□ -0.69
USP11-211ENST00000489111 USP27XA6NNY8 438 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 FOXN3O00409 490 aaPredicted RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 CD4P01730 458 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 P4HA1P13674 534 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 KCNE1P15382 129 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 IBSPP21815 317 aaPredicted RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 POLR2BP30876 1174 aaKnown RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 ATICP31939 592 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 GJA8P48165 433 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 PDE6CP51160 858 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 YWHAEP62258 255 aaKnown RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 PTK2Q05397 1052 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 MYO1EQ12965 1108 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 ARHGAP29Q52LW3 1261 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 ZNF667Q5HYK9 610 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 GLRA4Q5JXX5 417 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 IRF2BP2Q7Z5L9 587 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 FAM71AQ8IYT1 594 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 RNF169Q8NCN4 708 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 JAKMIP2Q96AA8 810 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 ELMO3Q96BJ8 720 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 ADAM2Q99965 735 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 TMEM106CQ9BVX2 250 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 IFIH1Q9BYX4 1025 aaKnown RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 GPR88Q9GZN0 384 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 APOBEC3GQ9HC16 384 aaKnown RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 KLK14Q9P0G3 267 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 SIX4Q9UIU6 781 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 UBQLN1Q9UMX0 589 aaKnown RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 AGAP1Q9UPQ3 857 aa10.76□□□□□ -0.69
USP11-211ENST00000489111 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.76□□□□□ -0.69
USP11-211ENST00000489111 ATF7P17544 494 aaPredicted RBP10.75□□□□□ -0.69
USP11-211ENST00000489111 GUCY2FP51841 1108 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 BPIFB4P59827 614 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 TNNC1P63316 161 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 DSC3Q14574 896 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 TRIM60Q495X7 471 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 DNTTIP2Q5QJE6 756 aaKnown RBP10.75□□□□□ -0.69
USP11-211ENST00000489111 TRAF7Q6Q0C0 670 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 SLC39A5Q6ZMH5 540 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 SCARA5Q6ZMJ2 495 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 ANKRD33Q7Z3H0 272 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 DIS3LQ8TF46 1054 aaKnown RBP10.75□□□□□ -0.69
USP11-211ENST00000489111 PGBD4Q96DM1 585 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms