RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ASIC1P78348 528 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 POU5F1Q01860 360 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 ITIH3Q06033 890 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 POSTNQ15063 836 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 EPM2AIP1Q7L775 607 aaPredicted RBP17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 CEP57Q86XR8 500 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 GRAMD1CQ8IYS0 662 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 ZSWIM2Q8NEG5 633 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 TSPAN18Q96SJ8 248 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 CLSTN3Q9BQT9 956 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 PYM1Q9BRP8 204 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 BLZF1Q9H2G9 400 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 AGO2Q9UKV8 859 aaKnown RBP17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 EXOC7Q9UPT5 735 aa17.36■□□□□ 0.37
CTDSP1-209ENST00000488627 I3L4J1 428 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 ADAM12O43184 909 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 CYP3A5P20815 502 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 LRPAP1P30533 357 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 AFMP43652 599 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 PPP2R3AQ06190 1150 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 CUL4BQ13620 913 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 CBX2Q14781 532 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 UNC13DQ70J99 1090 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 POMGNT1Q8WZA1 660 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 KIF12Q96FN5 646 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 PAGE5Q96GU1 130 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 PHF7Q9BWX1 381 aaPredicted RBP17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 GDPD2Q9HCC8 539 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 MYH15Q9Y2K3 1946 aa17.35■□□□□ 0.37
CTDSP1-209ENST00000488627 PVALEFA0A1B0GWK0 134 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 A0A1W2PQ27 194 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 A0A1W2PQ64 194 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 A0A1W2PQD8 194 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 TDRD15B5MCY1 1934 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 TGM5O43548 720 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 PAPLNO95428 1278 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 WEE2P0C1S8 567 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 TKTP29401 623 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 MYH11P35749 1972 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 GUCY2FP51841 1108 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 NUCB2P80303 420 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 RARS2Q5T160 578 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 SPATA1Q5VX52 437 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 JADE1Q6IE81 842 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 RSPO2Q6UXX9 243 aaPredicted RBP17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 PALB2Q86YC2 1186 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 CD302Q8IX05 232 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 ZNF507Q8TCN5 953 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 CBWD1Q9BRT8 395 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 ASB7Q9H672 318 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 UBQLN1Q9UMX0 589 aaKnown RBP17.34■□□□□ 0.37
CTDSP1-209ENST00000488627 C5orf42Q9H799 3197 aa17.33■□□□□ 0.37
CTDSP1-209ENST00000488627 LOC730098B7Z3J9 87 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 TRAPPC3O43617 180 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 KLRC4O43908 158 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 GLUD1P00367 558 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 NFICP08651 508 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 SPATA31D3P0C874 917 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 GARTP22102 1010 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 NDUFA8P51970 172 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 WNT7BP56706 349 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 CREMQ03060 361 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 MRPL58Q14197 206 aaKnown RBP17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 PSMD5Q16401 504 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 TMC5Q6UXY8 1006 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 GPR149Q86SP6 731 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 GLYCTKQ8IVS8 523 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 SYCP3Q8IZU3 236 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 HDAC7Q8WUI4 952 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 SUSD3Q96L08 255 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 SFXN1Q9H9B4 322 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 MAN1C1Q9NR34 630 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 MTRRQ9UBK8 725 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 USP25Q9UHP3 1055 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 DERAQ9Y315 318 aa17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.33■□□□□ 0.36
CTDSP1-209ENST00000488627 BDP1A6H8Y1 2624 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 PPEF2O14830 753 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 EIF3DO15371 548 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 TGFB1I1O43294 461 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 TBC1D4O60343 1298 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 SSTR3P32745 418 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 AARSP49588 968 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 RAB33AQ14088 237 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 CES5AQ6NT32 575 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 SCFD1Q8WVM8 642 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 FAM212AQ96EL1 285 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 POP1Q99575 1024 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 PLEKHA4Q9H4M7 779 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 POMKQ9H5K3 350 aa17.32■□□□□ 0.36
CTDSP1-209ENST00000488627 C2CD2Q9Y426 696 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms