RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 NFE2L3Q9Y4A8 694 aa3.05□□□□□ -1.92
DEPDC1-203ENST00000488146 PCDHA10Q9Y5I2 948 aa3.05□□□□□ -1.92
DEPDC1-203ENST00000488146 TRIP12Q14669 1992 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 IGLV3-22A0A075B6J6 115 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DENND3A2RUS2 1198 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 C2CD4DB7Z1M9 353 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 H7C4K7 107 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 J3QW42 95 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 N4BP3O15049 544 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DHX15O43143 795 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PRPF3O43395 683 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DHX16O60231 1041 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ATG13O75143 517 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 STK10O94804 968 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 THBS1P07996 1170 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 INSRRP14616 1297 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CYP3A5P20815 502 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 GRIA4P48058 902 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 GLUD2P49448 558 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 VCPP55072 806 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ASIC1P78348 528 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 SP2Q02086 613 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 NMIQ13287 307 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 SEPT6Q14141 434 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 FBXW10Q5XX13 1052 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CDCA2Q69YH5 1023 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PPP4R3AQ6IN85 833 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 TRIM46Q7Z4K8 759 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 LONP2Q86WA8 852 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 C1orf210Q8IVY1 113 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 C4orf19Q8IY42 314 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 BEST2Q8NFU1 509 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ASAP3Q8TDY4 903 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 COPS5Q92905 334 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 TMEM169Q96HH4 297 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 EAF1Q96JC9 268 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CNTNAP3BQ96NU0 1288 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CNTNAP3Q9BZ76 1288 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PSTPIP2Q9H939 334 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 C17orf75Q9HAS0 396 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 INCENPQ9NQS7 918 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DIAPH3Q9NSV4 1193 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 TMEM51Q9NW97 253 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CACNA2D2Q9NY47 1150 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 NXF1Q9UBU9 619 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PCDHA6Q9UN73 950 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DERAQ9Y315 318 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PCDHGC5Q9Y5F6 944 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PCDHGB2Q9Y5G2 931 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PCDHA8Q9Y5H6 950 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CNTNAP5Q8WYK1 1306 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 COL5A1P20908 1838 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 A0A1W2PP55 124 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 KANSL1LA0AUZ9 987 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 H0YCG3 227 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PAPSS1O43252 624 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 SSBP05455 408 aaKnown RBP eCLIP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 URODP06132 367 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ADRB2P07550 413 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF883P0CG24 379 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ZNF286BP0CG31 522 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 EIF2AK2P19525 551 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DNAJB1P25685 340 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 RPL9P32969 192 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 BCAR1P56945 870 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 AMPD2Q01433 879 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 NCBP1Q09161 790 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 MYBPC2Q14324 1141 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PFKFB3Q16875 520 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 FBXO43Q4G163 708 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 PREPLQ4J6C6 727 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ASCL5Q7RTU5 278 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 LYSMD3Q7Z3D4 306 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 RALYLQ86SE5 291 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CABP7Q86V35 215 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 CD302Q8IX05 232 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 THNSL1Q8IYQ7 743 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ABI1Q8IZP0 508 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM169BQ8N8A8 192 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 TCF25Q9BQ70 676 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ZKSCAN3Q9BRR0 538 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ANO3Q9BYT9 981 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 TM6SF1Q9BZW5 370 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DNAJC25Q9H1X3 360 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM124BQ9H5Z6 455 aaPredicted RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 C6orf50Q9HD87 102 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ARHGEF3Q9NR81 526 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 MRPL17Q9NRX2 175 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 HOMER2Q9NSB8 354 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ZSWIM5Q9P217 1185 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 EBF1Q9UH73 591 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DNMT3LQ9UJW3 386 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 DBR1Q9UK59 544 aaKnown RBP3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 ST3GAL5Q9UNP4 418 aa3.04□□□□□ -1.92
DEPDC1-203ENST00000488146 TNRC6BQ9UPQ9 1833 aaKnown RBP3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 COL4A3Q01955 1670 aa3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 SF3B1O75533 1304 aaKnown RBP eCLIP3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 FRMPD2Q68DX3 1309 aaPredicted RBP3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 A0A0D9SFI3 127 aa3.03□□□□□ -1.92
DEPDC1-203ENST00000488146 FAM86C2PA6NEL3 165 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms