RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, human

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF220-215	ENST00000487332	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	RPF1	Q9H9Y2	349 aa	Known RBP	11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	GOLGA2P5	Q9HBQ8	144 aa		11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	CD320	Q9NPF0	282 aa		11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	MAN1C1	Q9NR34	630 aa		11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	FBXW11	Q9UKB1	542 aa		11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	HPSE	Q9Y251	543 aa		11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	UST	Q9Y2C2	406 aa		11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	NR2E1	Q9Y466	385 aa		11.18	□□□□□ -0.62
RNF220-215	ENST00000487332	PVALEF	A0A1B0GWK0	134 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	C2CD2L	O14523	706 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	LDHA	P00338	332 aa	Known RBP	11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	ALAD	P13716	330 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	IDE	P14735	1019 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	CMA1	P23946	247 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	SSTR3	P32745	418 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	TNFSF9	P41273	254 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	CASP5	P51878	434 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	SNRPF	P62306	86 aa	Known RBP	11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	SPATA1	Q5VX52	437 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	SLC8B1	Q6J4K2	584 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	HASPIN	Q8TF76	798 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	SUSD3	Q96L08	255 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	SPATA32	Q96LK8	384 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	CACNG4	Q9UBN1	327 aa		11.17	□□□□□ -0.62
RNF220-215	ENST00000487332	AGO2	Q9UKV8	859 aa	Known RBP	11.17	□□□□□ -0.62
RNF220-215	ENST00000487332		A0A1W2PQ27	194 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332		A0A1W2PQ64	194 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332		A0A1W2PQD8	194 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	ANKRD63	C9JTQ0	380 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332		M0QZQ0	153 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	POLR2D	O15514	142 aa	Known RBP	11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	TGM5	O43548	720 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	DCX	O43602	365 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	ACTN4	O43707	911 aa	Known RBP	11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	TBC1D4	O60343	1298 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	IL18RAP	O95256	599 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	SLFN14	P0C7P3	912 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	MYB	P10242	640 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	ADSS	P30520	456 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	ASIC1	P78348	528 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	NUCB2	P80303	420 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	RAB33A	Q14088	237 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	MRPL58	Q14197	206 aa	Known RBP	11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	BMT2	Q1RMZ1	405 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	SEZ6	Q53EL9	994 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	ATAT1	Q5SQI0	421 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	ZBTB41	Q5SVQ8	909 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	RARS2	Q5T160	578 aa	Known RBP	11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	BRSK2	Q8IWQ3	736 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	CEP57L1	Q8IYX8	460 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	SPRYD3	Q8NCJ5	442 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	BEST2	Q8NFU1	509 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	POMGNT1	Q8WZA1	660 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	RABGGTA	Q92696	567 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	C18orf25	Q96B23	403 aa	Predicted RBP	11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	KIF12	Q96FN5	646 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	CLSTN3	Q9BQT9	956 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	PANK2	Q9BZ23	570 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	POMK	Q9H5K3	350 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	TUBGCP4	Q9UGJ1	667 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	KCNH3	Q9ULD8	1083 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	MAFF	Q9ULX9	164 aa		11.16	□□□□□ -0.62
RNF220-215	ENST00000487332	PLXNA3	P51805	1871 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	ARHGEF37	A1IGU5	675 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	LACTBL1	A8MY62	500 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332		H7C4K7	107 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	GPR37L1	O60883	481 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	ZMYND10	O75800	440 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	PFKFB1	P16118	471 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	TKT	P29401	623 aa	Known RBP	11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	BRCC3	P46736	316 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	TMEM132D	Q14C87	1099 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	UVSSA	Q2YD98	709 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	FAM26F	Q5R3K3	315 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	ZNF280D	Q6N043	979 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	CCDC149	Q6ZUS6	474 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	ZDHHC14	Q8IZN3	488 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	KREMEN2	Q8NCW0	462 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	APPL2	Q8NEU8	664 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	ZNF507	Q8TCN5	953 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	TMEM174	Q8WUU8	243 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	B3GALT6	Q96L58	329 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	FGFBP2	Q9BYJ0	223 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	CGN	Q9P2M7	1197 aa	Known RBP	11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	PCDHB8	Q9UN66	801 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332	NUB1	Q9Y5A7	615 aa		11.15	□□□□□ -0.62
RNF220-215	ENST00000487332		A0A0C4DFX4	3053 aa		11.14	□□□□□ -0.63
RNF220-215	ENST00000487332	ANO9	A1A5B4	782 aa		11.14	□□□□□ -0.63
RNF220-215	ENST00000487332	TISP43	B9A030	160 aa		11.14	□□□□□ -0.63
RNF220-215	ENST00000487332	EXTL3	O43909	919 aa		11.14	□□□□□ -0.63
RNF220-215	ENST00000487332	TYMP	P19971	482 aa		11.14	□□□□□ -0.63
RNF220-215	ENST00000487332	MCM4	P33991	863 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms