RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
PRKCB-207ENST00000486868 LRRC57Q8N9N7 239 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 TRIM11Q96F44 468 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 VCPIP1Q96JH7 1222 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 SCLT1Q96NL6 688 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 ACAP3Q96P50 834 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 CCDC94Q9BW85 323 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-207ENST00000486868 TLR10Q9BXR5 811 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 ABCB6Q9NP58 842 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-207ENST00000486868 ZSWIM8A7E2V4 1837 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 GRID2IPA4D2P6 1211 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 LACTBL1A8MY62 500 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 PALMO75781 387 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 CABYRO75952 493 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 FTLP02792 175 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-207ENST00000486868 MYBL1P10243 752 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 USP8P40818 1118 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 APLP1P51693 650 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 PRMT2P55345 433 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 GPC5P78333 572 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 CLEC16AQ2KHT3 1053 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-207ENST00000486868 ACAD10Q6JQN1 1059 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 SLC27A1Q6PCB7 646 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 SLC47A2Q86VL8 602 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 C7orf31Q8N865 590 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 KLHDC9Q8NEP7 349 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 PXYLP1Q8TE99 480 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 ZBTB10Q96DT7 871 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 PBKQ96KB5 322 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 PCDHB18PQ96TA0 734 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 PI4K2AQ9BTU6 479 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 MTMR12Q9C0I1 747 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 XYLT2Q9H1B5 865 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 CYP3A43Q9HB55 503 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 AVENQ9NQS1 362 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-207ENST00000486868 UVRAGQ9P2Y5 699 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 SRRDQ9UH36 339 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 GTF2IRD1Q9UHL9 959 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 GTF3C4Q9UKN8 822 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 ITGA11Q9UKX5 1188 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 GABRQQ9UN88 632 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 NUB1Q9Y5A7 615 aa12.47□□□□□ -0.41
PRKCB-207ENST00000486868 ENC1O14682 589 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 BUB1O43683 1085 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 ADAMTS4O75173 837 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 CST3P01034 146 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 CYP1A1P04798 512 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 CYP1A2P05177 515 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 C6orf222P0C671 652 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 CXCL8P10145 99 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 UNGP13051 313 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 KRT5P13647 590 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 P4HA1P13674 534 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 TFAMQ00059 246 aaKnown RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 PRKCZQ05513 592 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 CACNB2Q08289 660 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 SNX17Q15036 470 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 KIZQ2M2Z5 673 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 SEZ6Q53EL9 994 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 GNASQ5JWF2 1037 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 MAP3K21Q5TCX8 1036 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-207ENST00000486868 RSPH3Q86UC2 560 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 CREG2Q8IUH2 290 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 CXorf38Q8TB03 319 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 RUBCNQ92622 972 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 OSBPL9Q96SU4 736 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 BCO2Q9BYV7 579 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 HDAC6Q9UBN7 1215 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 PCDHB4Q9Y5E5 795 aa12.46□□□□□ -0.41
PRKCB-207ENST00000486868 DOCK3Q8IZD9 2030 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 TREHO43280 583 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 TBC1D8O95759 1140 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 LSM8O95777 96 aaKnown RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 HMGCRP04035 888 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 MMEP08473 750 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 PAFAH1B1P43034 410 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 MYL6P60660 151 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 RBP5P82980 135 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 BEX3Q00994 111 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 CENPCQ03188 943 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 TMEM132DQ14C87 1099 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 CLUL1Q15846 466 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 ERCC6LQ2NKX8 1250 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF699Q32M78 642 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 XKR4Q5GH76 650 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 CCSAPQ6IQ19 270 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms