RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RASSF4Q9H2L5 321 aa19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 MTRF1LQ9UGC7 380 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-207ENST00000486828 PASKQ96RG2 1323 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 A0A0B4J269 797 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 UBA1P22314 1058 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 RRM1P23921 792 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 NSFP46459 744 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 PPP2R2AP63151 447 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 CUL2Q13617 745 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 LBX2Q6XYB7 198 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 HOOK3Q86VS8 718 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 MSTO1Q9BUK6 570 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 TARS2Q9BW92 718 aaKnown RBP19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 FAM129AQ9BZQ8 928 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 TMEM134Q9H6X4 195 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 FBXO40Q9UH90 709 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 ADGRA2Q96PE1 1338 aa19.2■□□□□ 0.66
PDLIM7-207ENST00000486828 GSTTP1A0A1W2PQM5 241 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 CLDN3O15551 220 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 TARBP2Q15633 366 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 ODF2Q5BJF6 829 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 DENND2CQ68D51 928 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 TRIM72Q6ZMU5 477 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 B4GALNT4Q76KP1 1039 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 MON1BQ7L1V2 547 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 SLCO2A1Q92959 643 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 TLCD1Q96CP7 247 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 PCYT2Q99447 389 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 APOBEC3GQ9HC16 384 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 LRRC4CQ9HCJ2 640 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 USP2O75604 605 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 FARP2O94887 1054 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 ECEL1O95672 775 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 MAGEA9P43362 315 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 PRKG1Q13976 671 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 ZBTB41Q5SVQ8 909 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 NLRP14Q86W24 1093 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 MAIP1Q8WWC4 291 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 ART4Q93070 314 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 RNF25Q96BH1 459 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 CYFIP2Q96F07 1278 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 TRIM7Q9C029 511 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 ADARB2Q9NS39 739 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 NRBP2Q9NSY0 501 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 ANKFY1Q9P2R3 1169 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 FAM169AQ9Y6X4 670 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
PDLIM7-207ENST00000486828 CNTNAP2Q9UHC6 1331 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 ANKRD65E5RJM6 399 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 SHBGP04278 402 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 EDN1P05305 212 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 CLTAP09496 248 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 EDNRBP24530 442 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 KCNJ1P48048 391 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 HIRAP54198 1017 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 MAGOHP61326 146 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 TREML2Q5T2D2 321 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 RIOX2Q8IUF8 465 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 ZNF473Q8WTR7 871 aaKnown RBP19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 PAGR1Q9BTK6 254 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 BTBD7Q9P203 1132 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 PTPN22Q9Y2R2 807 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 PCDHB4Q9Y5E5 795 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 SNCAIPQ9Y6H5 919 aa19.18■□□□□ 0.66
PDLIM7-207ENST00000486828 TBXAS1P24557 533 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 CAPSQ13938 189 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 SLMAPQ14BN4 828 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 SGO2Q562F6 1265 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 LIN9Q5TKA1 542 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 FAM160B1Q5W0V3 765 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 SPATS2Q86XZ4 545 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 ABRAQ8N0Z2 381 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 MYCBPAPQ8TBZ2 947 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 CCT8L2Q96SF2 557 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 CNTN6Q9UQ52 1028 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 DCDC2CA8MYV0 355 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 ADCY3O60266 1144 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 PROSCO94903 275 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 FAM107AO95990 144 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 GNA15P30679 374 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 SEC24CP53992 1094 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 NOMO3P69849 1222 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 PTP4A2Q12974 167 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 VGLL4Q14135 290 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 TMEM270Q6UE05 265 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 VCPIP1Q96JH7 1222 aa19.17■□□□□ 0.66
PDLIM7-207ENST00000486828 ATXN2Q99700 1313 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 SOWAHBA6NEL2 793 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 E7EVH7 732 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 PEX10O60683 326 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 CAND2O75155 1236 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 PAEPP09466 180 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 POTEJP0CG39 1038 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 YY1P25490 414 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 STAT5BP51692 787 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 NOP14P78316 857 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 BYSLQ13895 437 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 NEDD9Q14511 834 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 SLC29A2Q14542 456 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms