RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 LARSQ9P2J5 1176 aaKnown RBP24.5■■□□□ 1.51
SREBF1-214ENST00000486311 H0YCG3 227 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 TBC1D4O60343 1298 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 GFRA3O60609 400 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 NCKAP1LP55160 1127 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 CACNB1Q02641 598 aaPredicted RBP24.49■■□□□ 1.51
SREBF1-214ENST00000486311 ZNF461Q8TAF7 563 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 ITFG1Q8TB96 612 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 GPR152Q8TDT2 470 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 FGF14Q92915 247 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 DNMT3BQ9UBC3 853 aaKnown RBP24.49■■□□□ 1.51
SREBF1-214ENST00000486311 KCNH3Q9ULD8 1083 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 ODF2LQ9ULJ1 636 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 CA14Q9ULX7 337 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 NUB1Q9Y5A7 615 aa24.49■■□□□ 1.51
SREBF1-214ENST00000486311 VWA8A3KMH1 1905 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 CLDN3O15551 220 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 BMP15O95972 392 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 UBA7P41226 1012 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 NBL1P41271 181 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 ROR1Q01973 937 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 MRPL58Q14197 206 aaKnown RBP24.48■■□□□ 1.51
SREBF1-214ENST00000486311 SEZ6Q53EL9 994 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 PARM1Q6UWI2 310 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 DOCK8Q8NF50 2099 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 ST13P5Q8NFI4 369 aaPredicted RBP24.48■■□□□ 1.51
SREBF1-214ENST00000486311 CALML4Q96GE6 196 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 RPP25Q9BUL9 199 aaKnown RBP24.48■■□□□ 1.51
SREBF1-214ENST00000486311 HCFC1R1Q9NWW0 138 aa24.48■■□□□ 1.51
SREBF1-214ENST00000486311 ABLIM3O94929 683 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 PABPC1LQ4VXU2 614 aaKnown RBP24.47■■□□□ 1.51
SREBF1-214ENST00000486311 MTSS1LQ765P7 747 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 BRAPQ7Z569 592 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 DTWD2Q8NBA8 298 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 SUSD3Q96L08 255 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 REEP2Q9BRK0 252 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 HAPLN2Q9GZV7 340 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 TBC1D17Q9HA65 648 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 PLEKHA5Q9HAU0 1116 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 DMDP11532 3685 aa24.47■■□□□ 1.51
SREBF1-214ENST00000486311 ARHGEF37A1IGU5 675 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 WDR27A2RRH5 827 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 H7C4K7 107 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 STK25O00506 426 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 CLTAP09496 248 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 SCP2P22307 547 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 PHLDB3Q6NSJ2 640 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 HAUS6Q7Z4H7 955 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 GPBP1Q86WP2 473 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 LRRC15Q8TF66 581 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 ARHGEF3Q9NR81 526 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 BLOC1S4Q9NUP1 217 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 TUBGCP4Q9UGJ1 667 aa24.46■■□□□ 1.51
SREBF1-214ENST00000486311 CXCL8P10145 99 aa24.45■■□□□ 1.5
SREBF1-214ENST00000486311 ATF2P15336 505 aa24.45■■□□□ 1.5
SREBF1-214ENST00000486311 RFX1P22670 979 aa24.45■■□□□ 1.5
SREBF1-214ENST00000486311 LONP1P36776 959 aaKnown RBP24.45■■□□□ 1.5
SREBF1-214ENST00000486311 ZNF131P52739 623 aa24.45■■□□□ 1.5
SREBF1-214ENST00000486311 NPAS3Q8IXF0 933 aa24.45■■□□□ 1.5
SREBF1-214ENST00000486311 BICD1Q96G01 975 aa24.45■■□□□ 1.5
SREBF1-214ENST00000486311 AVENQ9NQS1 362 aaPredicted RBP24.45■■□□□ 1.5
SREBF1-214ENST00000486311 FBXL5Q9UKA1 691 aa24.45■■□□□ 1.5
SREBF1-214ENST00000486311 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.45■■□□□ 1.5
SREBF1-214ENST00000486311 TTC26A0AVF1 554 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 ELF1P32519 619 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 MCM4P33991 863 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 MATR3P43243 847 aaKnown RBP eCLIP24.44■■□□□ 1.5
SREBF1-214ENST00000486311 GPC5P78333 572 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 GRIN1Q05586 938 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 TCEAL8Q8IYN2 117 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 APPL2Q8NEU8 664 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 PARVGQ9HBI0 331 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 TBX20Q9UMR3 447 aa24.44■■□□□ 1.5
SREBF1-214ENST00000486311 MRPS23Q9Y3D9 190 aaKnown RBP24.44■■□□□ 1.5
SREBF1-214ENST00000486311 PRRG1O14668 218 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 PIGRP01833 764 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 LRG1P02750 347 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 RHOP08100 348 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 PLCG1P19174 1290 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 LRPAP1P30533 357 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 LIG4P49917 911 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 ARPP19P56211 112 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 CUL4AQ13619 759 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 DHX8Q14562 1220 aaKnown RBP24.43■■□□□ 1.5
SREBF1-214ENST00000486311 KARSQ15046 597 aaKnown RBP24.43■■□□□ 1.5
SREBF1-214ENST00000486311 ANGPT1Q15389 498 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 SF3A1Q15459 793 aaKnown RBP24.43■■□□□ 1.5
SREBF1-214ENST00000486311 ZBTB6Q15916 424 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 KYAT1Q16773 422 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 CTXN3Q4LDR2 81 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 TPGS2Q68CL5 300 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 ZNF280DQ6N043 979 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 MYCT1Q8N699 235 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 RAD54LQ92698 747 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 DDX12PQ92771 950 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 PCDHB8Q9UN66 801 aa24.43■■□□□ 1.5
SREBF1-214ENST00000486311 FAM13AO94988 1023 aa24.42■■□□□ 1.5
SREBF1-214ENST00000486311 CYP3A5P20815 502 aa24.42■■□□□ 1.5
SREBF1-214ENST00000486311 MCM6Q14566 821 aa24.42■■□□□ 1.5
SREBF1-214ENST00000486311 SLC5A9Q2M3M2 681 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms