RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 CALML4Q96GE6 196 aa28.08■■■□□ 2.09
HLA-F-227ENST00000485513 CA14Q9ULX7 337 aa28.08■■■□□ 2.09
HLA-F-227ENST00000485513 PDCD11Q14690 1871 aaKnown RBP28.08■■■□□ 2.09
HLA-F-227ENST00000485513 STK25O00506 426 aa28.07■■■□□ 2.08
HLA-F-227ENST00000485513 BMP15O95972 392 aa28.07■■■□□ 2.08
HLA-F-227ENST00000485513 MATR3P43243 847 aaKnown RBP eCLIP28.07■■■□□ 2.08
HLA-F-227ENST00000485513 MCL1Q07820 350 aa28.07■■■□□ 2.08
HLA-F-227ENST00000485513 SLC10A6Q3KNW5 377 aa28.07■■■□□ 2.08
HLA-F-227ENST00000485513 ST13P5Q8NFI4 369 aaPredicted RBP28.07■■■□□ 2.08
HLA-F-227ENST00000485513 ODF2LQ9ULJ1 636 aa28.07■■■□□ 2.08
HLA-F-227ENST00000485513 SYN3O14994 580 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 RFX1P22670 979 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 NCKAP1LP55160 1127 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 SLC8B1Q6J4K2 584 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 BRAPQ7Z569 592 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 GPBP1Q86WP2 473 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 ITFG1Q8TB96 612 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 GPR152Q8TDT2 470 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 FGF13Q92913 245 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 BICD1Q96G01 975 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 HCFC1R1Q9NWW0 138 aa28.06■■■□□ 2.08
HLA-F-227ENST00000485513 ZFHX2Q9C0A1 2572 aaPredicted RBP28.06■■■□□ 2.08
HLA-F-227ENST00000485513 ROR1Q01973 937 aa28.05■■■□□ 2.08
HLA-F-227ENST00000485513 DHX8Q14562 1220 aaKnown RBP28.05■■■□□ 2.08
HLA-F-227ENST00000485513 PABPC1LQ4VXU2 614 aaKnown RBP28.05■■■□□ 2.08
HLA-F-227ENST00000485513 PARM1Q6UWI2 310 aa28.05■■■□□ 2.08
HLA-F-227ENST00000485513 HAUS6Q7Z4H7 955 aa28.05■■■□□ 2.08
HLA-F-227ENST00000485513 ZNF461Q8TAF7 563 aa28.05■■■□□ 2.08
HLA-F-227ENST00000485513 REEP2Q9BRK0 252 aa28.05■■■□□ 2.08
HLA-F-227ENST00000485513 DNMT3BQ9UBC3 853 aaKnown RBP28.05■■■□□ 2.08
HLA-F-227ENST00000485513 USP34Q70CQ2 3546 aa28.05■■■□□ 2.08
HLA-F-227ENST00000485513 NOTCH4Q99466 2003 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 H7C4K7 107 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 GFRA3O60609 400 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 CXCL8P10145 99 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 MTSS1LQ765P7 747 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 CCDC105Q8IYK2 499 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 FGF14Q92915 247 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 SUSD3Q96L08 255 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 RPP25Q9BUL9 199 aaKnown RBP28.04■■■□□ 2.08
HLA-F-227ENST00000485513 HAPLN2Q9GZV7 340 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 PLEKHA5Q9HAU0 1116 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 SLC2A4RGQ9NR83 387 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 KCNH3Q9ULD8 1083 aa28.04■■■□□ 2.08
HLA-F-227ENST00000485513 MYH15Q9Y2K3 1946 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 TBC1D4O60343 1298 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 CLTAP09496 248 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 ELF1P32519 619 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 MCM4P33991 863 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 LONP1P36776 959 aaKnown RBP28.03■■■□□ 2.08
HLA-F-227ENST00000485513 ARPP19P56211 112 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 DTWD2Q8NBA8 298 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 RASSF8Q8NHQ8 419 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 LRRC15Q8TF66 581 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 KCNN1Q92952 543 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 TBC1D17Q9HA65 648 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 BLOC1S4Q9NUP1 217 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 TUBGCP4Q9UGJ1 667 aa28.03■■■□□ 2.08
HLA-F-227ENST00000485513 WDR27A2RRH5 827 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 PROB1E7EW31 1015 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 ABLIM3O94929 683 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 FAM13AO94988 1023 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 PLCG1P19174 1290 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 LIG4P49917 911 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 GRIN1Q05586 938 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 MRPL58Q14197 206 aaKnown RBP28.02■■■□□ 2.08
HLA-F-227ENST00000485513 SF3A1Q15459 793 aaKnown RBP28.02■■■□□ 2.08
HLA-F-227ENST00000485513 MYCT1Q8N699 235 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 ARHGEF3Q9NR81 526 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 FBXL5Q9UKA1 691 aa28.02■■■□□ 2.08
HLA-F-227ENST00000485513 ARHGEF37A1IGU5 675 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 PRRG1O14668 218 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 LRG1P02750 347 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 ATF2P15336 505 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 SCP2P22307 547 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 NBL1P41271 181 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 MCM6Q14566 821 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 KARSQ15046 597 aaKnown RBP28.01■■■□□ 2.07
HLA-F-227ENST00000485513 CTXN3Q4LDR2 81 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 NPAS3Q8IXF0 933 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 APPL2Q8NEU8 664 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 RAD54LQ92698 747 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 PARVGQ9HBI0 331 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 TBX20Q9UMR3 447 aa28.01■■■□□ 2.07
HLA-F-227ENST00000485513 MRPS23Q9Y3D9 190 aaKnown RBP28.01■■■□□ 2.07
HLA-F-227ENST00000485513 TTC26A0AVF1 554 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 VPS37CA5D8V6 355 aaPredicted RBP28■■■□□ 2.07
HLA-F-227ENST00000485513 K7ENM7 598 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 HNRNPDLO14979 420 aaKnown RBP28■■■□□ 2.07
HLA-F-227ENST00000485513 KRT18P05783 430 aaKnown RBP28■■■□□ 2.07
HLA-F-227ENST00000485513 RHOP08100 348 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 ZNF131P52739 623 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 GPC5P78333 572 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 SPAG1Q07617 926 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 CUL4AQ13619 759 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 KYAT1Q16773 422 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 ZNF280DQ6N043 979 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 PHLDB3Q6NSJ2 640 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 ING5Q8WYH8 240 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 DDX12PQ92771 950 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms