RNA–Protein interactions for RNA: ENST00000485092.5

SDHB-206, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-206ENST00000485092 NCR1O76036 304 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 ENDOD1O94919 500 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 IL2RBP14784 551 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 GSPT1P15170 499 aaKnown RBP6.2□□□□□ -1.42
SDHB-206ENST00000485092 ALOX15P16050 662 aaPredicted RBP6.2□□□□□ -1.42
SDHB-206ENST00000485092 KRT4P19013 534 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 ZFP36P26651 326 aaKnown RBP6.2□□□□□ -1.42
SDHB-206ENST00000485092 SREBF1P36956 1147 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 PPP3CAQ08209 521 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 KLF1Q13351 362 aaPredicted RBP6.2□□□□□ -1.42
SDHB-206ENST00000485092 MEX3CQ5U5Q3 659 aaKnown RBP6.2□□□□□ -1.42
SDHB-206ENST00000485092 Q6ZPA2 131 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 DDX42Q86XP3 938 aaKnown RBP eCLIP6.2□□□□□ -1.42
SDHB-206ENST00000485092 FBXO18Q8NFZ0 1043 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 SENP6Q9GZR1 1112 aaPredicted RBP6.2□□□□□ -1.42
SDHB-206ENST00000485092 PUS7LQ9H0K6 701 aaKnown RBP6.2□□□□□ -1.42
SDHB-206ENST00000485092 SLC5A4Q9NY91 659 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 PCDHGA2Q9Y5H1 932 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 HS3ST4Q9Y661 456 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 HECW1Q76N89 1606 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 AFF2P51816 1311 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 MROH2AA6NES4 1674 aa6.2□□□□□ -1.42
SDHB-206ENST00000485092 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 FOXN1O15353 648 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 RAP2BP61225 183 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 FAM102AQ5T9C2 384 aaPredicted RBP6.19□□□□□ -1.42
SDHB-206ENST00000485092 NECAB2Q7Z6G3 386 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 DEFB132Q7Z7B7 95 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 PHACTR3Q96KR7 559 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 ATP8A1Q9Y2Q0 1164 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 USP15Q9Y4E8 981 aaPredicted RBP6.19□□□□□ -1.42
SDHB-206ENST00000485092 KIAA1210Q9ULL0 1709 aa6.19□□□□□ -1.42
SDHB-206ENST00000485092 ATRNL1Q5VV63 1379 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 CENPVL1A0A0U1RR11 272 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 FAM171A2A8MVW0 826 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 ZNF185O15231 689 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 NDUFA10O95299 355 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 HLA-DOAP06340 250 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 RAP2AP10114 183 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 AGXTP21549 392 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 CHN2P52757 468 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 INHBEP58166 350 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 MGAT2Q10469 447 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 FSTL1Q12841 308 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 PDCD4Q53EL6 469 aaKnown RBP6.18□□□□□ -1.42
SDHB-206ENST00000485092 AFMIDQ63HM1 303 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 VRK3Q8IV63 474 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 DRC7Q8IY82 874 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 CNTD1Q8N815 330 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 MRI1Q9BV20 369 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 LDAHQ9H6V9 325 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 ZNF277Q9NRM2 450 aaPredicted RBP6.18□□□□□ -1.42
SDHB-206ENST00000485092 TMEM140Q9NV12 185 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 C11orf21Q9P2W6 132 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 DNM3Q9UQ16 869 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 DMRT1Q9Y5R6 373 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 REREQ9P2R6 1566 aa6.18□□□□□ -1.42
SDHB-206ENST00000485092 DNMT1P26358 1616 aaKnown RBP6.17□□□□□ -1.42
SDHB-206ENST00000485092 LRRC9Q6ZRR7 1453 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 DISP1Q96F81 1524 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 TMEM200CA6NKL6 621 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 DRGXA6NNA5 263 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 TEX33O43247 280 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 B3GALT2O43825 422 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 ATP5JP18859 108 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 GUCY1A2P33402 732 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 MXRA7P84157 204 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 CLUL1Q15846 466 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 BEAN1Q3B7T3 259 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
SDHB-206ENST00000485092 CASKIN2Q8WXE0 1202 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 STON2Q8WXE9 905 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 SSH1Q8WYL5 1049 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 CYFIP2Q96F07 1278 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 TEX101Q9BY14 249 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 REXO4Q9GZR2 422 aaKnown RBP6.17□□□□□ -1.42
SDHB-206ENST00000485092 AJAP1Q9UKB5 411 aaPredicted RBP6.17□□□□□ -1.42
SDHB-206ENST00000485092 ATP11BQ9Y2G3 1177 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 FPGT-TNNI3KV9GXZ4 949 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 TTBK1Q5TCY1 1321 aaPredicted RBP6.17□□□□□ -1.42
SDHB-206ENST00000485092 DEPDC5O75140 1603 aa6.17□□□□□ -1.42
SDHB-206ENST00000485092 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.17□□□□□ -1.42
SDHB-206ENST00000485092 SHANK3Q9BYB0 1731 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 KDM5DQ9BY66 1539 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 TRIM75PA6NK02 468 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 WNT10BO00744 389 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 LPXNO60711 386 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 RHOBTB3O94955 611 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 BMPR1AP36894 532 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 ALDH1A3P47895 512 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 SEPT2Q15019 361 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 SMN1Q16637 294 aaKnown RBP6.16□□□□□ -1.42
SDHB-206ENST00000485092 AGAP9Q5VTM2 703 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 PCSK4Q6UW60 755 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 RHOT2Q8IXI1 618 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 CPEB3Q8NE35 698 aaKnown RBP6.16□□□□□ -1.42
SDHB-206ENST00000485092 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.16□□□□□ -1.42
SDHB-206ENST00000485092 SLC2A13Q96QE2 648 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 AGAP2Q99490 1192 aa6.16□□□□□ -1.42
SDHB-206ENST00000485092 SERHL2Q9H4I8 314 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms