RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 C2orf40Q9H1Z8 148 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 IFT122Q9HBG6 1241 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 AGPAT5Q9NUQ2 364 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 FAM105AQ9NUU6 356 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
PTCD3-215ENST00000484203 RGL1Q9NZL6 768 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 DPP7Q9UHL4 492 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 CD207Q9UJ71 328 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 DBR1Q9UK59 544 aaKnown RBP6.83□□□□□ -1.32
PTCD3-215ENST00000484203 POLIQ9UNA4 740 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 SSX2IPQ9Y2D8 614 aa6.83□□□□□ -1.32
PTCD3-215ENST00000484203 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.83□□□□□ -1.32
PTCD3-215ENST00000484203 ZMYM2Q9UBW7 1377 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 PIEZO1Q92508 2521 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 INO80B-WBP1J3KQ70 363 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 MAP3K6O95382 1288 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 LARGE1O95461 756 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 EYA4O95677 639 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 BMP15O95972 392 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 IBSPP21815 317 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 SCP2P22307 547 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 U2AF2P26368 475 aaKnown RBP eCLIP6.82□□□□□ -1.321e-7■□□□□ 8
PTCD3-215ENST00000484203 RPA1P27694 616 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 RARRES1P49788 294 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 EFNA5P52803 228 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 NPEPPSP55786 919 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 PTENP60484 403 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 COASYQ13057 564 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 DRP2Q13474 957 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 CAMK1Q14012 370 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 CTTNQ14247 550 aaKnown RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 SMC1AQ14683 1233 aaKnown RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 SMAD2Q15796 467 aaKnown RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 EARS2Q5JPH6 523 aaKnown RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 TTC38Q5R3I4 469 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM184AQ6ZMB5 413 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 TMC7Q7Z402 723 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 MRPL10Q7Z7H8 261 aaKnown RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 PPFIBP1Q86W92 1011 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 ZBTB8OSQ8IWT0 167 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM143Q96AN5 459 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 FAM193BQ96PV7 902 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 TCF25Q9BQ70 676 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM175Q9BSA9 504 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 TRIM6Q9C030 488 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 CWH43Q9H720 699 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 ENTPD7Q9NQZ7 604 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 GJB4Q9NTQ9 266 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 PRMT7Q9NVM4 692 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-215ENST00000484203 PCDHB2Q9Y5E7 798 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 IRAK3Q9Y616 596 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 BRWD1Q9NSI6 2320 aa6.82□□□□□ -1.32
PTCD3-215ENST00000484203 ARHGEF35A5YM69 484 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 A6NHS1 94 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 SOWAHDA6NJG2 315 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 H3BQ06 376 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-215ENST00000484203 H3BQV1 296 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 FSCN2O14926 492 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 SLC26A4O43511 780 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 FZD6O60353 706 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 MMP20O60882 483 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 C1RP00736 705 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ALDH2P05091 517 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ITGA4P13612 1032 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ATF7P17544 494 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-215ENST00000484203 NCLP19338 710 aaKnown RBP6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ATP2B1P20020 1258 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 PDCP20941 246 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ARL2P36404 184 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 PRPHP41219 470 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 TECP42680 631 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 NRIP1P48552 1158 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 BCAR1P56945 870 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ITIH3Q06033 890 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 PCSK7Q16549 785 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ECM1Q16610 540 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 DUSP6Q16828 381 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM31Q5JXX7 168 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 CLLU1OSQ5K130 101 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-215ENST00000484203 KRT79Q5XKE5 535 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 ZNF438Q7Z4V0 828 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 DDX53Q86TM3 631 aaKnown RBP6.81□□□□□ -1.32
PTCD3-215ENST00000484203 CATSPER3Q86XQ3 398 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 GPR65Q8IYL9 337 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 SLC39A11Q8N1S5 342 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 MRPL43Q8N983 215 aaKnown RBP6.81□□□□□ -1.32
PTCD3-215ENST00000484203 SMRP1Q8NCR6 262 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 KIFAP3Q92845 792 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 CASP10Q92851 521 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 IFT74Q96LB3 600 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 NECTIN4Q96NY8 510 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 MDFIQ99750 246 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 SH2D3AQ9BRG2 576 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 TIPINQ9BVW5 301 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 CSRNP2Q9H175 543 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 RSAD1Q9HA92 442 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 C17orf75Q9HAS0 396 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 DZANK1Q9NVP4 752 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms