RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 LRRC15Q8TF66 581 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 LARP4BQ92615 738 aaKnown RBP21.66■■□□□ 1.06
HPS4-213ENST00000483631 MFSD1Q9H3U5 465 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 WNT16Q9UBV4 365 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 TBX20Q9UMR3 447 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 NUB1Q9Y5A7 615 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 TTC26A0AVF1 554 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 GALR2O43603 387 aaPredicted RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 TRAK2O60296 914 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 TBC1D4O60343 1298 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 DDIT3P35638 169 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 LIG4P49917 911 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 MRE11P49959 708 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 CACNB1Q02641 598 aaPredicted RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 GRIN1Q05586 938 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 MRPL58Q14197 206 aaKnown RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 KARSQ15046 597 aaKnown RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 PTPAQ15257 358 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 VARS2Q5ST30 1063 aaKnown RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 RSPO2Q6UXX9 243 aaPredicted RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 GET4Q7L5D6 327 aaPredicted RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 ALYREFQ86V81 257 aaKnown RBP21.65■■□□□ 1.06
HPS4-213ENST00000483631 SLC44A3Q8N4M1 653 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 MYCT1Q8N699 235 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 SLC7A14Q8TBB6 771 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 BICD1Q96G01 975 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 SUSD3Q96L08 255 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 ST6GALNAC4Q9H4F1 302 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 CDH7Q9ULB5 785 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 KCNH3Q9ULD8 1083 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 MAFFQ9ULX9 164 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 NOTCH4Q99466 2003 aa21.65■■□□□ 1.06
HPS4-213ENST00000483631 HNRNPDLO14979 420 aaKnown RBP21.64■■□□□ 1.05
HPS4-213ENST00000483631 XPOTO43592 962 aaKnown RBP21.64■■□□□ 1.05
HPS4-213ENST00000483631 ABLIM3O94929 683 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 ADRB2P07550 413 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 SRFP11831 508 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 LRPAP1P30533 357 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 GTF2BQ00403 316 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 MCM6Q14566 821 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 GRASPQ7Z6J2 395 aaPredicted RBP21.64■■□□□ 1.05
HPS4-213ENST00000483631 APPL2Q8NEU8 664 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 C18orf25Q96B23 403 aaPredicted RBP21.64■■□□□ 1.05
HPS4-213ENST00000483631 BACH2Q9BYV9 841 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 STK17AQ9UEE5 414 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 CCDC39Q9UFE4 941 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 FBXL21Q9UKT6 434 aa21.64■■□□□ 1.05
HPS4-213ENST00000483631 SRPRBQ9Y5M8 271 aaKnown RBP21.64■■□□□ 1.05
HPS4-213ENST00000483631 ARHGEF37A1IGU5 675 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 I3L4J1 428 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 K7ENM7 598 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 OGTO15294 1046 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 TBCAO75347 108 aaKnown RBP21.63■■□□□ 1.05
HPS4-213ENST00000483631 KRT18P05783 430 aaKnown RBP21.63■■□□□ 1.05
HPS4-213ENST00000483631 CXCL8P10145 99 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 SYT1P21579 422 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 MATR3P43243 847 aaKnown RBP eCLIP21.63■■□□□ 1.05
HPS4-213ENST00000483631 ROR1Q01973 937 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 PPP2R3AQ06190 1150 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 HTR4Q13639 388 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 ZBTB6Q15916 424 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 TPGS2Q68CL5 300 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 CD302Q8IX05 232 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 TMEM105Q8N8V8 129 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 FIZ1Q96SL8 496 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 RTP3Q9BQQ7 232 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 OXCT2Q9BYC2 517 aaPredicted RBP21.63■■□□□ 1.05
HPS4-213ENST00000483631 HAPLN2Q9GZV7 340 aa21.63■■□□□ 1.05
HPS4-213ENST00000483631 AVENQ9NQS1 362 aaPredicted RBP21.63■■□□□ 1.05
HPS4-213ENST00000483631 UBQLN1Q9UMX0 589 aaKnown RBP21.63■■□□□ 1.05
HPS4-213ENST00000483631 CCL16O15467 120 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 FAM189A1O60320 539 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 ATF2P15336 505 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 AOC1P19801 751 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 PAX3P23760 479 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 POU5F1Q01860 360 aaKnown RBP21.62■■□□□ 1.05
HPS4-213ENST00000483631 RESTQ13127 1097 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 DHX8Q14562 1220 aaKnown RBP21.62■■□□□ 1.05
HPS4-213ENST00000483631 ZNF280DQ6N043 979 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 MTSS1LQ765P7 747 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 MAP4K3Q8IVH8 894 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 SLC2A4RGQ9NR83 387 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 FBXO2Q9UK22 296 aaPredicted RBP21.62■■□□□ 1.05
HPS4-213ENST00000483631 CLIC4Q9Y696 253 aa21.62■■□□□ 1.05
HPS4-213ENST00000483631 A0A0B4J269 797 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 WDR27A2RRH5 827 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 NPR3P17342 541 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 ELF1P32519 619 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 MCM4P33991 863 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 TXLNAP40222 546 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 AARSP49588 968 aaKnown RBP eCLIP21.61■■□□□ 1.05
HPS4-213ENST00000483631 SEZ6Q53EL9 994 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 CWF19L1Q69YN2 538 aaKnown RBP21.61■■□□□ 1.05
HPS4-213ENST00000483631 TCEAL8Q8IYN2 117 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 KRI1Q8N9T8 703 aaKnown RBP21.61■■□□□ 1.05
HPS4-213ENST00000483631 RSAD2Q8WXG1 361 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 HVCN1Q96D96 273 aa21.61■■□□□ 1.05
HPS4-213ENST00000483631 ZSCAN16Q9H4T2 348 aaPredicted RBP21.61■■□□□ 1.05
HPS4-213ENST00000483631 RPF1Q9H9Y2 349 aaKnown RBP21.61■■□□□ 1.05
HPS4-213ENST00000483631 PCDHB8Q9UN66 801 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms