RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 BLOC1S1P78537 153 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 CREMQ03060 361 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 FAM50AQ14320 339 aaKnown RBP4.9□□□□□ -1.63
GTF3A-207ENST00000482655 UBXN2BQ14CS0 331 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 OTUD7BQ6GQQ9 843 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 PGM2L1Q6PCE3 622 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 Q6YL49 198 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 MIGA2Q7L4E1 593 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 PPM1NQ8N819 430 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 ZNF277Q9NRM2 450 aaPredicted RBP4.9□□□□□ -1.63
GTF3A-207ENST00000482655 KLHL11Q9NVR0 708 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 RUVBL1Q9Y265 456 aaKnown RBP4.9□□□□□ -1.63
GTF3A-207ENST00000482655 ACTL7AQ9Y615 435 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 PNPLA7Q6ZV29 1317 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 ABCC8Q09428 1581 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 CEP170Q5SW79 1584 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 PHLDB1Q86UU1 1377 aa4.9□□□□□ -1.63
GTF3A-207ENST00000482655 SOGA1O94964 1423 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 FGD5Q6ZNL6 1462 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 MAGI1Q96QZ7 1491 aaPredicted RBP4.89□□□□□ -1.63
GTF3A-207ENST00000482655 CUX1P39880 1505 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 TRIM75PA6NK02 468 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 MARCH11A6NNE9 402 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 FOSP01100 380 aaPredicted RBP4.89□□□□□ -1.63
GTF3A-207ENST00000482655 PDGFRBP09619 1106 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 HKR1P10072 659 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 FPR1P21462 350 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 PROZP22891 400 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 TP53BP2Q13625 1128 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 SEPT2Q15019 361 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 ACAP2Q15057 778 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 ABHD17BQ5VST6 288 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 METRNLQ641Q3 311 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 FOXR2Q6PJQ5 311 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 SEM1Q6ZVN7 128 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 UBE3BQ7Z3V4 1068 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 RHOT1Q8IXI2 618 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 RNF31Q96EP0 1072 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 MKS1Q9NXB0 559 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 TESQ9UGI8 421 aaKnown RBP4.89□□□□□ -1.63
GTF3A-207ENST00000482655 ZNHIT2Q9UHR6 403 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 INTUQ9ULD6 942 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 SIK3Q9Y2K2 1263 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 SHROOM2Q13796 1616 aa4.89□□□□□ -1.63
GTF3A-207ENST00000482655 A0A1B0GTW7 788 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 PIPSLA2A3N6 862 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 WNT10BO00744 389 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 MARCH6O60337 910 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 SPDEFO95238 335 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 GPANK1O95872 356 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 NUDT3O95989 172 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 LMNAP02545 664 aaKnown RBP4.88□□□□□ -1.63
GTF3A-207ENST00000482655 ITGAMP11215 1152 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 DDCP20711 480 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 PCSK1P29120 753 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 SLC6A9P48067 706 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 CDKN1CP49918 316 aaPredicted RBP4.88□□□□□ -1.63
GTF3A-207ENST00000482655 SLC16A1P53985 500 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 COL10A1Q03692 680 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 PLEKHG6Q3KR16 790 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 GPR150Q8NGU9 434 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 NRG4Q8WWG1 115 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 DPF2Q92785 391 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 COQ10AQ96MF6 247 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 ADAM2Q99965 735 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 ZSWIM1Q9BR11 485 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 ALOXE3Q9BYJ1 711 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 RIOX1Q9H6W3 641 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 MRFAP1Q9Y605 127 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 PBRM1Q86U86 1689 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 MYBBP1AQ9BQG0 1328 aaKnown RBP4.88□□□□□ -1.63
GTF3A-207ENST00000482655 GRIN2BQ13224 1484 aa4.88□□□□□ -1.63
GTF3A-207ENST00000482655 DIP2BQ9P265 1576 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 KIAA0391O15091 583 aaKnown RBP4.87□□□□□ -1.63
GTF3A-207ENST00000482655 XPOTO43592 962 aaKnown RBP4.87□□□□□ -1.63
GTF3A-207ENST00000482655 ERN1O75460 977 aaKnown RBP4.87□□□□□ -1.63
GTF3A-207ENST00000482655 MT-CO1P00395 513 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 FGFR4P22455 802 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 TGM1P22735 817 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 GCSHP23434 173 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 IARSP41252 1262 aaKnown RBP4.87□□□□□ -1.63
GTF3A-207ENST00000482655 HSD11B2P80365 405 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 EXOSC10Q01780 885 aaKnown RBP4.87□□□□□ -1.63
GTF3A-207ENST00000482655 OCA2Q04671 838 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 MTM1Q13496 603 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 ERCC6LQ2NKX8 1250 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 RSPH3Q86UC2 560 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 TMEM132CQ8N3T6 1108 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 FITM2Q8N6M3 262 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 OR2I1PQ8NGU4 316 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 ASB10Q8WXI3 467 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 MYOCQ99972 504 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 TDP1Q9NUW8 608 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 FBXO34Q9NWN3 711 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 FAM30AQ9NZY2 134 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 KLHL42Q9P2K6 505 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 SLC23A1Q9UHI7 598 aa4.87□□□□□ -1.63
GTF3A-207ENST00000482655 MTO1Q9Y2Z2 717 aaKnown RBP4.87□□□□□ -1.63
GTF3A-207ENST00000482655 NUP160Q12769 1436 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms