RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
FAM3D-202ENST00000482623 CXCL16Q9H2A7 254 aa13.22□□□□□ -0.29
FAM3D-202ENST00000482623 POLD4Q9HCU8 107 aa13.22□□□□□ -0.29
FAM3D-202ENST00000482623 CDY1Q9Y6F8 540 aa13.22□□□□□ -0.29
FAM3D-202ENST00000482623 KRBA1A5PL33 1030 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 VWA3AA6NCI4 1184 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 PP2D1A8MPX8 630 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 SLC16A4O15374 487 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 ADAM12O43184 909 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 PI15O43692 258 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 ECI2O75521 394 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 OAZ2O95190 189 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 PIGRP01833 764 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 GJB2P29033 226 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 LRPAP1P30533 357 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 UBA7P41226 1012 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 ZNF131P52739 623 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 NCKAP1LP55160 1127 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 ZBTB6Q15916 424 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 SLC10A6Q3KNW5 377 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 PABPC1LQ4VXU2 614 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 GLRA4Q5JXX5 417 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 LARP1BQ659C4 914 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 GET4Q7L5D6 327 aaPredicted RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 ZMAT2Q96NC0 199 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 DNMT3BQ9UBC3 853 aaKnown RBP13.21□□□□□ -0.29
FAM3D-202ENST00000482623 CACNG4Q9UBN1 327 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 SIT1Q9Y3P8 196 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 NUB1Q9Y5A7 615 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 NUMBLQ9Y6R0 609 aa13.21□□□□□ -0.29
FAM3D-202ENST00000482623 MTCL1Q9Y4B5 1905 aaKnown RBP13.21□□□□□ -0.3
FAM3D-202ENST00000482623 KMT2EQ8IZD2 1858 aa13.21□□□□□ -0.3
FAM3D-202ENST00000482623 TTC26A0AVF1 554 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 M0QZQ0 153 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 NARSO43776 548 aaKnown RBP13.2□□□□□ -0.3
FAM3D-202ENST00000482623 CFHP08603 1231 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 PDCP20941 246 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 MARCKSP29966 332 aaPredicted RBP13.2□□□□□ -0.3
FAM3D-202ENST00000482623 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
FAM3D-202ENST00000482623 ANGPT1Q15389 498 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 CEP120Q8N960 986 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 C3orf58Q8NDZ4 430 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 GPR152Q8TDT2 470 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 NKD2Q969F2 451 aaPredicted RBP13.2□□□□□ -0.3
FAM3D-202ENST00000482623 GPR88Q9GZN0 384 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 ST6GALNAC4Q9H4F1 302 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 ARHGEF3Q9NR81 526 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 AFF4Q9UHB7 1163 aaKnown RBP13.2□□□□□ -0.3
FAM3D-202ENST00000482623 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
FAM3D-202ENST00000482623 STK25O00506 426 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 CCL16O15467 120 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 LRG1P02750 347 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 RFX1P22670 979 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 DDIT3P35638 169 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 BRCC3P46736 316 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 AARSP49588 968 aaKnown RBP eCLIP13.19□□□□□ -0.3
FAM3D-202ENST00000482623 MLLT6P55198 1093 aaPredicted RBP13.19□□□□□ -0.3
FAM3D-202ENST00000482623 OSTNP61366 133 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 FOXK2Q01167 660 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 ROR1Q01973 937 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 BEST2Q8NFU1 509 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 FGF14Q92915 247 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 CCSER1Q9C0I3 900 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 PARVGQ9HBI0 331 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 TRPV5Q9NQA5 729 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 DLGAP2Q9P1A6 1054 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 FBXL5Q9UKA1 691 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 TBX20Q9UMR3 447 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 UBQLN1Q9UMX0 589 aaKnown RBP13.19□□□□□ -0.3
FAM3D-202ENST00000482623 DERAQ9Y315 318 aa13.19□□□□□ -0.3
FAM3D-202ENST00000482623 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
FAM3D-202ENST00000482623 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
FAM3D-202ENST00000482623 MYO15AQ9UKN7 3530 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 KANSL1LA0AUZ9 987 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 PRR23AA6NEV1 266 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 PRRG1O14668 218 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 OGTO15294 1046 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 RHOP08100 348 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 MYBP10242 640 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 GPC5P78333 572 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 GTF2BQ00403 316 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 ZNF528Q3MIS6 628 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 SLC44A4Q53GD3 710 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 CYP4A22Q5TCH4 519 aa13.18□□□□□ -0.3
FAM3D-202ENST00000482623 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms