RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 PALB2Q86YC2 1186 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 TMEM161BQ8NDZ6 487 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 LNX1Q8TBB1 728 aaPredicted RBP8.49□□□□□ -1.05
CCNC-204ENST00000482541 PIK3R5Q8WYR1 880 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 STAMQ92783 540 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 ASIC4Q96FT7 647 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 ACAP3Q96P50 834 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 PRRX2Q99811 253 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 TTPALQ9BTX7 342 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 CDT1Q9H211 546 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 CXCL16Q9H2A7 254 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 WDR6Q9NNW5 1121 aaKnown RBP8.49□□□□□ -1.05
CCNC-204ENST00000482541 SLC38A7Q9NVC3 462 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 ODF2LQ9ULJ1 636 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 MYO10Q9HD67 2058 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 KCNE1P15382 129 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 CLCNKBP51801 687 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 SF3A1Q15459 793 aaKnown RBP8.49□□□□□ -1.05
CCNC-204ENST00000482541 UPP1Q16831 310 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 ZNF568Q3ZCX4 644 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 RTP2Q5QGT7 225 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 PRSS55Q6UWB4 352 aaPredicted RBP8.49□□□□□ -1.05
CCNC-204ENST00000482541 MPZL3Q6UWV2 235 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.49□□□□□ -1.05
CCNC-204ENST00000482541 RTL10Q7L3V2 364 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 SUGP1Q8IWZ8 645 aaKnown RBP8.49□□□□□ -1.05
CCNC-204ENST00000482541 FBXL6Q8N531 539 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 KREMEN2Q8NCW0 462 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 INTS4Q96HW7 963 aaKnown RBP8.49□□□□□ -1.05
CCNC-204ENST00000482541 B3GALT6Q96L58 329 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 PLIN2Q99541 437 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 BACH2Q9BYV9 841 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 CCSER1Q9C0I3 900 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 CACNG4Q9UBN1 327 aa8.49□□□□□ -1.05
CCNC-204ENST00000482541 TECTAO75443 2155 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 MYH11P35749 1972 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 TRIP11Q15643 1979 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 PLXNA3P51805 1871 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 CFAP99D6REC4 459 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 ABLIM1O14639 778 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 CLDN3O15551 220 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 ACTN4O43707 911 aaKnown RBP8.48□□□□□ -1.05
CCNC-204ENST00000482541 SPATA31D3P0C874 917 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 MAPTP10636 758 aaKnown RBP8.48□□□□□ -1.05
CCNC-204ENST00000482541 FGFR3P22607 806 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 ABCD1P33897 745 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 DDIT3P35638 169 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 NCKAP1LP55160 1127 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 OSTNP61366 133 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 RAD51AP2Q09MP3 1159 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 PSMD5Q16401 504 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 ARSHQ5FYA8 562 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 GLRA4Q5JXX5 417 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 SPATA31D4Q6ZUB0 917 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 CEP120Q8N960 986 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 HASPINQ8TF76 798 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 SMG7Q92540 1137 aaKnown RBP8.48□□□□□ -1.05
CCNC-204ENST00000482541 CLSTN3Q9BQT9 956 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 PRKD2Q9BZL6 878 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 PIDD1Q9HB75 910 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCNC-204ENST00000482541 IGSF9Q9P2J2 1179 aa8.48□□□□□ -1.05
CCNC-204ENST00000482541 DENND4AQ7Z401 1863 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 VPS37CA5D8V6 355 aaPredicted RBP8.47□□□□□ -1.05
CCNC-204ENST00000482541 RFPL2O75678 378 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 HNRNPA1P09651 372 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCNC-204ENST00000482541 RPL17P18621 184 aaKnown RBP8.47□□□□□ -1.05
CCNC-204ENST00000482541 HOXA9P31269 272 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 RPL9P32969 192 aaKnown RBP8.47□□□□□ -1.05
CCNC-204ENST00000482541 MCL1Q07820 350 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 RAB33AQ14088 237 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 KYAT1Q16773 422 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 UVSSAQ2YD98 709 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 CD300LGQ6UXG3 332 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 ANKS3Q6ZW76 656 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 HAUS6Q7Z4H7 955 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 GLYCTKQ8IVS8 523 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 ANKK1Q8NFD2 765 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 FEZF2Q8TBJ5 459 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 TSC1Q92574 1164 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 NXPE3Q969Y0 559 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 ZNF707Q96C28 371 aaPredicted RBP8.47□□□□□ -1.05
CCNC-204ENST00000482541 ZBTB45Q96K62 511 aaPredicted RBP8.47□□□□□ -1.05
CCNC-204ENST00000482541 SNX27Q96L92 541 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 PLEKHA5Q9HAU0 1116 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 BLOC1S4Q9NUP1 217 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 CNTN3Q9P232 1028 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.47□□□□□ -1.05
CCNC-204ENST00000482541 BACE2Q9Y5Z0 518 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 C2orf16Q68DN1 1984 aa8.47□□□□□ -1.05
CCNC-204ENST00000482541 CLUHO75153 1309 aa8.46□□□□□ -1.05
CCNC-204ENST00000482541 ASGR2P07307 311 aa8.46□□□□□ -1.05
CCNC-204ENST00000482541 PLCG1P19174 1290 aa8.46□□□□□ -1.05
CCNC-204ENST00000482541 SYT1P21579 422 aa8.46□□□□□ -1.05
CCNC-204ENST00000482541 AVPR2P30518 371 aa8.46□□□□□ -1.05
CCNC-204ENST00000482541 ZNF131P52739 623 aa8.46□□□□□ -1.05
CCNC-204ENST00000482541 SOX4Q06945 474 aaPredicted RBP8.46□□□□□ -1.05
CCNC-204ENST00000482541 TDGQ13569 410 aa8.46□□□□□ -1.05
CCNC-204ENST00000482541 NOLC1Q14978 699 aaKnown RBP eCLIP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms