RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 RIPOR3Q96MK2 946 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 IPO9Q96P70 1041 aaKnown RBP21.93■■□□□ 1.1
VPS36-204ENST00000480923 PYM1Q9BRP8 204 aaKnown RBP21.93■■□□□ 1.1
VPS36-204ENST00000480923 FGFBP2Q9BYJ0 223 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 TUBGCP4Q9UGJ1 667 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 DPP7Q9UHL4 492 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 CPSF3Q9UKF6 684 aaKnown RBP21.93■■□□□ 1.1
VPS36-204ENST00000480923 AGO2Q9UKV8 859 aaKnown RBP21.93■■□□□ 1.1
VPS36-204ENST00000480923 KCNH3Q9ULD8 1083 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 NUB1Q9Y5A7 615 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 STYXL1Q9Y6J8 313 aa21.93■■□□□ 1.1
VPS36-204ENST00000480923 I3L4J1 428 aa21.92■■□□□ 1.1
VPS36-204ENST00000480923 FGFR3P22607 806 aa21.92■■□□□ 1.1
VPS36-204ENST00000480923 MTHFRP42898 656 aa21.92■■□□□ 1.1
VPS36-204ENST00000480923 ACOT2P49753 483 aa21.92■■□□□ 1.1
VPS36-204ENST00000480923 POSTNQ15063 836 aa21.92■■□□□ 1.1
VPS36-204ENST00000480923 LNX1Q8TBB1 728 aaPredicted RBP21.92■■□□□ 1.1
VPS36-204ENST00000480923 KHSRPQ92945 711 aaKnown RBP eCLIP21.92■■□□□ 1.1
VPS36-204ENST00000480923 NECTIN4Q96NY8 510 aa21.92■■□□□ 1.1
VPS36-204ENST00000480923 UBQLN1Q9UMX0 589 aaKnown RBP21.92■■□□□ 1.1
VPS36-204ENST00000480923 TGM5O43548 720 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 XPOTO43592 962 aaKnown RBP21.91■■□□□ 1.1
VPS36-204ENST00000480923 PRPF6O94906 941 aaKnown RBP21.91■■□□□ 1.1
VPS36-204ENST00000480923 SPATA31D3P0C874 917 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 TKTP29401 623 aaKnown RBP21.91■■□□□ 1.1
VPS36-204ENST00000480923 ATAT1Q5SQI0 421 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 SPATA31D4Q6ZUB0 917 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 STXBP4Q6ZWJ1 553 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 CD302Q8IX05 232 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 CEP57L1Q8IYX8 460 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 C7orf25Q9BPX7 421 aa21.91■■□□□ 1.1
VPS36-204ENST00000480923 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.91■■□□□ 1.1
VPS36-204ENST00000480923 CMA1P23946 247 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 CASP1P29466 404 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 MCM4P33991 863 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 AFMP43652 599 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 JADE1Q6IE81 842 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 CNNM4Q6P4Q7 775 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 HPS3Q969F9 1004 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 TSPAN18Q96SJ8 248 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 CLSTN3Q9BQT9 956 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 SCAND2PQ9GZW5 306 aaPredicted RBP21.9■■□□□ 1.1
VPS36-204ENST00000480923 BLZF1Q9H2G9 400 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 POMKQ9H5K3 350 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 EPHX3Q9H6B9 360 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 SERTAD1Q9UHV2 236 aa21.9■■□□□ 1.1
VPS36-204ENST00000480923 A0A1B0GVL5 298 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 LOC730098B7Z3J9 87 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 TULP1O00294 542 aaPredicted RBP21.89■■□□□ 1.09
VPS36-204ENST00000480923 C1RP00736 705 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 PFKFB1P16118 471 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 CYP3A5P20815 502 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 SP100P23497 879 aaPredicted RBP21.89■■□□□ 1.09
VPS36-204ENST00000480923 ADSSP30520 456 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 ZBTB6Q15916 424 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 GRAMD1CQ8IYS0 662 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 TMEM130Q8N3G9 435 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 BEST2Q8NFU1 509 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 PLEKHA4Q9H4M7 779 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 TMEM206Q9H813 350 aa21.89■■□□□ 1.09
VPS36-204ENST00000480923 ADRB2P07550 413 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 SLFN14P0C7P3 912 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 LRPAP1P30533 357 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 GUCY2FP51841 1108 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 TMEM132DQ14C87 1099 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 FAM26FQ5R3K3 315 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 LILRA6Q6PI73 481 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 ANKS3Q6ZW76 656 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 UNC13DQ70J99 1090 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 GPR149Q86SP6 731 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 RNF135Q8IUD6 432 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 KREMEN2Q8NCW0 462 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 GLIS3Q8NEA6 775 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 FEZF2Q8TBJ5 459 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 HDAC7Q8WUI4 952 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 MTRRQ9UBK8 725 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 MUC3AQ02505 3323 aa21.88■■□□□ 1.09
VPS36-204ENST00000480923 ADAM12O43184 909 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 NFICP08651 508 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 GARTP22102 1010 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 OR1D2P34982 312 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 CUL4BQ13620 913 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 SPATA1Q5VX52 437 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 CMASQ8NFW8 434 aaPredicted RBP21.87■■□□□ 1.09
VPS36-204ENST00000480923 NOC3LQ8WTT2 800 aaKnown RBP21.87■■□□□ 1.09
VPS36-204ENST00000480923 SAAL1Q96ER3 474 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 FAM213AQ9BRX8 229 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 ASB7Q9H672 318 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 DERAQ9Y315 318 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 NR2E1Q9Y466 385 aa21.87■■□□□ 1.09
VPS36-204ENST00000480923 CITO14578 2027 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 CCDC195A0A1B0GUA6 201 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 PI4K2BG5E9Z4 385 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 SYN3O14994 580 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 ACTN4O43707 911 aaKnown RBP21.86■■□□□ 1.09
VPS36-204ENST00000480923 RFPL2O75678 378 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 LDHAP00338 332 aaKnown RBP21.86■■□□□ 1.09
VPS36-204ENST00000480923 ALADP13716 330 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 NUCB2P80303 420 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 POU5F1Q01860 360 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms