RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MSTO1Q9BUK6 570 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 ZHX3Q9H4I2 956 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 ASB7Q9H672 318 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 RPF1Q9H9Y2 349 aaKnown RBP12.47□□□□□ -0.41
CCM2-213ENST00000480658 KCNK12Q9HB15 430 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 BLOC1S4Q9NUP1 217 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 LIMD1Q9UGP4 676 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 CDY1Q9Y6F8 540 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 C5orf42Q9H799 3197 aa12.47□□□□□ -0.41
CCM2-213ENST00000480658 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
CCM2-213ENST00000480658 RFPL2O75678 378 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 LRG1P02750 347 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 FSHRP23945 695 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 LRPAP1P30533 357 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 OR1D2P34982 312 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 STAT6P42226 847 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 CLCN5P51795 746 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 AMPD3Q01432 767 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 RESTQ13127 1097 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 PLD1Q13393 1074 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 SLC39A14Q15043 492 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
CCM2-213ENST00000480658 USP37Q86T82 979 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 GLYCTKQ8IVS8 523 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 CEP120Q8N960 986 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 BEST2Q8NFU1 509 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 SLC7A14Q8TBB6 771 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 ZNF707Q96C28 371 aaPredicted RBP12.46□□□□□ -0.41
CCM2-213ENST00000480658 RTP3Q9BQQ7 232 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 MAGEF1Q9HAY2 307 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 POLD4Q9HCU8 107 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 AVENQ9NQS1 362 aaPredicted RBP12.46□□□□□ -0.41
CCM2-213ENST00000480658 OLFML3Q9NRN5 406 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 WNT16Q9UBV4 365 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 FBXO2Q9UK22 296 aaPredicted RBP12.46□□□□□ -0.41
CCM2-213ENST00000480658 FBXL21Q9UKT6 434 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 DSEQ9UL01 958 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 C2CD2Q9Y426 696 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
CCM2-213ENST00000480658 MYH11P35749 1972 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 PLXNA3P51805 1871 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 A0A0B4J269 797 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 TTC26A0AVF1 554 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 PRRG1O14668 218 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 ZNF197O14709 1029 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 PPP6R2O75170 966 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 MICAL2O94851 1124 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 IL18RAPO95256 599 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 LDHAP00338 332 aaKnown RBP12.45□□□□□ -0.42
CCM2-213ENST00000480658 CXCL8P10145 99 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 SRFP11831 508 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 LAMP2P13473 410 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 ATF2P15336 505 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 RFX1P22670 979 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
CCM2-213ENST00000480658 PFKPQ01813 784 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 YWHAHQ04917 246 aaPredicted RBP12.45□□□□□ -0.42
CCM2-213ENST00000480658 DHX8Q14562 1220 aaKnown RBP12.45□□□□□ -0.42
CCM2-213ENST00000480658 MCM6Q14566 821 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 STK38Q15208 465 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 PTPAQ15257 358 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 SLC10A6Q3KNW5 377 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 PABPC1LQ4VXU2 614 aaKnown RBP12.45□□□□□ -0.42
CCM2-213ENST00000480658 GET4Q7L5D6 327 aaPredicted RBP12.45□□□□□ -0.42
CCM2-213ENST00000480658 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 KIF12Q96FN5 646 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 SHDQ96IW2 340 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 TNMDQ9H2S6 317 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 TMEM206Q9H813 350 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 MRPL44Q9H9J2 332 aaKnown RBP12.45□□□□□ -0.42
CCM2-213ENST00000480658 GDE1Q9NZC3 331 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 CDH7Q9ULB5 785 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 USP20Q9Y2K6 914 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 CLIC4Q9Y696 253 aa12.45□□□□□ -0.42
CCM2-213ENST00000480658 OR6C75A6NL08 312 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 M0QZQ0 153 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 ABLIM3O94929 683 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 YEATS4O95619 227 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 ADRB2P07550 413 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 SPATA31D3P0C874 917 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 ODC1P11926 461 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 RPL17P18621 184 aaKnown RBP12.44□□□□□ -0.42
CCM2-213ENST00000480658 TKTP29401 623 aaKnown RBP12.44□□□□□ -0.42
CCM2-213ENST00000480658 AVPR2P30518 371 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
CCM2-213ENST00000480658 PNPLA4P41247 253 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 ROR1Q01973 937 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
CCM2-213ENST00000480658 SMARCB1Q12824 385 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
CCM2-213ENST00000480658 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 ASTLQ6HA08 431 aaPredicted RBP12.44□□□□□ -0.42
CCM2-213ENST00000480658 IQCEQ6IPM2 695 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 SPATA31D4Q6ZUB0 917 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 CCDC65Q8IXS2 484 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 TCEAL8Q8IYN2 117 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 KCNG4Q8TDN1 519 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 DDX12PQ92771 950 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 ZMAT2Q96NC0 199 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms