RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 NPHP3-ACAD11A0A0J9YXS1 232 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 H3BQV1 296 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 DCNP07585 359 aaKnown RBP20.6■□□□□ 0.89
ABCF3-214ENST00000480562 PLS3P13797 630 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 GJB2P29033 226 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 SLC12A3P55017 1021 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 ARPP19P56211 112 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 ROR1Q01973 937 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
ABCF3-214ENST00000480562 TMEM130Q8N3G9 435 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 NKD2Q969F2 451 aaPredicted RBP20.6■□□□□ 0.89
ABCF3-214ENST00000480562 CDK5RAP3Q96JB5 506 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 KXD1Q9BQD3 176 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 NUB1Q9Y5A7 615 aa20.6■□□□□ 0.89
ABCF3-214ENST00000480562 PLA2G4BP0C869 781 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 MAPTP10636 758 aaKnown RBP20.59■□□□□ 0.89
ABCF3-214ENST00000480562 SMTNP53814 917 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 SLC10A6Q3KNW5 377 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 SLC8B1Q6J4K2 584 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 PHLDB3Q6NSJ2 640 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 MTSS1LQ765P7 747 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 NPAS3Q8IXF0 933 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 FOXQ1Q9C009 403 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 KCNH3Q9ULD8 1083 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 MRPS23Q9Y3D9 190 aaKnown RBP20.59■□□□□ 0.89
ABCF3-214ENST00000480562 MYH15Q9Y2K3 1946 aa20.59■□□□□ 0.89
ABCF3-214ENST00000480562 CITO14578 2027 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 WDR27A2RRH5 827 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 SYN3O14994 580 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 TOM1L1O75674 476 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 RPL9P32969 192 aaKnown RBP20.58■□□□□ 0.89
ABCF3-214ENST00000480562 NOLC1Q14978 699 aaKnown RBP eCLIP20.58■□□□□ 0.89
ABCF3-214ENST00000480562 TMEM119Q4V9L6 283 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 RTL10Q7L3V2 364 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 ZNF461Q8TAF7 563 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 HAPLN2Q9GZV7 340 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 TUBGCP4Q9UGJ1 667 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 SIT1Q9Y3P8 196 aa20.58■□□□□ 0.89
ABCF3-214ENST00000480562 PRRG1O14668 218 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 TBC1D4O60343 1298 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 ABLIM3O94929 683 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 LRG1P02750 347 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 RHOP08100 348 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 ELF1P32519 619 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 MATR3P43243 847 aaKnown RBP eCLIP20.57■□□□□ 0.88
ABCF3-214ENST00000480562 SPAG1Q07617 926 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 SNW1Q13573 536 aaKnown RBP20.57■□□□□ 0.88
ABCF3-214ENST00000480562 SLC5A9Q2M3M2 681 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 ARSHQ5FYA8 562 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 POTEHQ6S545 545 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 ZPBP2Q6X784 338 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 MCRS1Q96EZ8 462 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 KCNG1Q9UIX4 513 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 FBXL5Q9UKA1 691 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 MYH11P35749 1972 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 COL4A3Q01955 1670 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 FAM186AA6NE01 2351 aa20.57■□□□□ 0.88
ABCF3-214ENST00000480562 ARHGEF37A1IGU5 675 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 H7C4K7 107 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 CLDN3O15551 220 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 LRRN2O75325 713 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 SEC24AO95486 1093 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 CXCL8P10145 99 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 MCM4P33991 863 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 MRPL58Q14197 206 aaKnown RBP20.56■□□□□ 0.88
ABCF3-214ENST00000480562 DHX8Q14562 1220 aaKnown RBP20.56■□□□□ 0.88
ABCF3-214ENST00000480562 CTXN3Q4LDR2 81 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 ARL6IP4Q66PJ3 421 aaKnown RBP20.56■□□□□ 0.88
ABCF3-214ENST00000480562 KCTD17Q8N5Z5 321 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 BICD1Q96G01 975 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 SUSD3Q96L08 255 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 TBC1D32Q96NH3 1257 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 CYP4F11Q9HBI6 524 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 DLGAP2Q9P1A6 1054 aa20.56■□□□□ 0.88
ABCF3-214ENST00000480562 GLULP15104 373 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 ATF2P15336 505 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 CEBPBP17676 345 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 PTPN2P17706 415 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 STARD6P59095 220 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 MCL1Q07820 350 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 PJA1Q8NG27 643 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 LRRC15Q8TF66 581 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 SHDQ96IW2 340 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 CORO1BQ9BR76 489 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 KCND2Q9NZV8 630 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
ABCF3-214ENST00000480562 CENPBP07199 599 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-214ENST00000480562 NCKAP1LP55160 1127 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 MLF2Q15773 248 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-214ENST00000480562 SLC44A4Q53GD3 710 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 HAUS6Q7Z4H7 955 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 GPBP1Q86WP2 473 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 TCEAL8Q8IYN2 117 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 ADSSL1Q8N142 457 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 DDX12PQ92771 950 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 TCEAL4Q96EI5 215 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 REEP2Q9BRK0 252 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 PLA2G2FQ9BZM2 168 aa20.54■□□□□ 0.88
ABCF3-214ENST00000480562 LARSQ9P2J5 1176 aaKnown RBP20.54■□□□□ 0.88
ABCF3-214ENST00000480562 INSL5Q9Y5Q6 135 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms