RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 NCOA4Q13772 614 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 CLLU1OSQ5K130 101 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 KLHDC7AQ5VTJ3 777 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 TMC6Q7Z403 805 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 C7orf61Q8IZ16 206 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 BEST2Q8NFU1 509 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 TAF4BQ92750 862 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 ZFP42Q96MM3 310 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 GAD1Q99259 594 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 CRACR2AQ9BSW2 395 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 NAA15Q9BXJ9 866 aaKnown RBP18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 XYLT2Q9H1B5 865 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 SLC38A7Q9NVC3 462 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 KLK14Q9P0G3 267 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 TRIP11Q15643 1979 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 HOXA2O43364 376 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 EVI5O60447 810 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 CST3P01034 146 aaPredicted RBP18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 ATICP31939 592 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 GRIK3Q13003 919 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 PTPN21Q16825 1174 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 C16orf59Q7L2K0 433 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 LRRC52Q8N7C0 313 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 FAM84AQ96KN4 292 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 LSM14BQ9BX40 385 aaKnown RBP18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 MMRN2Q9H8L6 949 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 MIOSQ9NXC5 875 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 DPP3Q9NY33 737 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 APEX2Q9UBZ4 518 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 CAPN11Q9UMQ6 739 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
SCAMP3-207ENST00000480219 EPHB6O15197 1021 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 THP07101 528 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 AFF1P51825 1210 aaKnown RBP18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 FPGSQ05932 587 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 BIRC3Q13489 604 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 SGSM1Q2NKQ1 1148 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 GLB1LQ6UWU2 654 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 TNS4Q8IZW8 715 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 NEK11Q8NG66 645 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 BADQ92934 168 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 FAM81BQ96LP2 452 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 RPS6KC1Q96S38 1066 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 CEP72Q9P209 647 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 TUBGCP4Q9UGJ1 667 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 MYO6Q9UM54 1294 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 PCDHB7Q9Y5E2 793 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 COL4A6Q14031 1691 aa18.15■□□□□ 0.5
SCAMP3-207ENST00000480219 CCDC85CA6NKD9 419 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 PIRO00625 290 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 LRRN2O75325 713 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 ITGB3P05106 788 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 ACTN1P12814 892 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 UCHL3P15374 230 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 PIK3CAP42336 1068 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 SCNN1GP51170 649 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 RBP5P82980 135 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 GCNT1Q02742 428 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 SOX4Q06945 474 aaPredicted RBP18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 DSC1Q08554 894 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 NOMO2Q5JPE7 1267 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 GLRA4Q5JXX5 417 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 SCARA3Q6AZY7 606 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 PHLDB3Q6NSJ2 640 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 PSRC1Q6PGN9 363 aaPredicted RBP18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 HELQQ8TDG4 1101 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 BAP1Q92560 729 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 TOP1MTQ969P6 601 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 JAKMIP2Q96AA8 810 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 C18orf25Q96B23 403 aaPredicted RBP18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 FAM124BQ9H5Z6 455 aaPredicted RBP18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 FAM207AQ9NSI2 230 aaPredicted RBP18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 KANSL3Q9P2N6 904 aa18.14■□□□□ 0.49
SCAMP3-207ENST00000480219 PHACTR2O75167 634 aa18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 TRIM21P19474 475 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 PAX3P23760 479 aa18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 RPL9P32969 192 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 FXR1P51114 621 aaKnown RBP eCLIP18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 WDR5P61964 334 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 C9orf57Q5W0N0 161 aa18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 ENOSF1Q7L5Y1 443 aa18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 NT5C1BQ96P26 610 aa18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 CASD1Q96PB1 797 aa18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 RC3H2Q9HBD1 1191 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 APOBEC3GQ9HC16 384 aaKnown RBP18.13■□□□□ 0.49
SCAMP3-207ENST00000480219 RNF225M0QZC1 329 aaPredicted RBP18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 MFAP3LO75121 409 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 FGFR1P11362 822 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 FECHP22830 423 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 POLR2BP30876 1174 aaKnown RBP18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 HNRNPH3P31942 346 aaKnown RBP18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 GUCY2FP51841 1108 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 JAM2P57087 298 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 GSDMDP57764 484 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 MYL6P60660 151 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 NOP14P78316 857 aaKnown RBP18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 ZBED6P86452 979 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 APBA1Q02410 837 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 TUSC3Q13454 348 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms