RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 FAXDC2Q96IV6 333 aa12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 CHP1Q99653 195 aa12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 AJAP1Q9UKB5 411 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 ITGA11Q9UKX5 1188 aa12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 R3HCC1Q9Y3T6 440 aaKnown RBP12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 PCDHB2Q9Y5E7 798 aa12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 PDCD11Q14690 1871 aaKnown RBP12.88□□□□□ -0.35
TM9SF4-206ENST00000479591 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 ZNF500O60304 480 aaPredicted RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 PQBP1O60828 265 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 ZNF623O75123 536 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 LRRN2O75325 713 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 ASS1P00966 412 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 KCNE1P15382 129 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 ATICP31939 592 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 NOP14P78316 857 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 ARHGAP44Q17R89 818 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 TDRD12Q587J7 1177 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 E4F1Q66K89 784 aaPredicted RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 RAD9BQ6WBX8 426 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 C1orf127Q8N9H9 656 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 BEST2Q8NFU1 509 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 SHC3Q92529 594 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 CCDC42Q96M95 316 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 TMEM106CQ9BVX2 250 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 APOL6Q9BWW8 343 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 FTHL17Q9BXU8 183 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 GPR88Q9GZN0 384 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 DEF6Q9H4E7 631 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 NHEJ1Q9H9Q4 299 aaPredicted RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 PRDM10Q9NQV6 1147 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 ARHGAP20Q9P2F6 1191 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 PARP2Q9UGN5 583 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 UBQLN1Q9UMX0 589 aaKnown RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 HES2Q9Y543 173 aa12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 EPN1Q9Y6I3 576 aaPredicted RBP12.87□□□□□ -0.35
TM9SF4-206ENST00000479591 BRCA2P51587 3418 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 A0A0U1RQF3 1178 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 EIF3CLB5ME19 914 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 NDUFA10O95299 355 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 IPO7O95373 1038 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 CST3P01034 146 aaPredicted RBP12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 ITGB3P05106 788 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 CCDC175P0C221 793 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 ITGA4P13612 1032 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 AKAP5P24588 427 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 RBP5P82980 135 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 KLHL30Q0D2K2 578 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 ZBTB6Q15916 424 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 TATDN2Q93075 761 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 PGBD4Q96DM1 585 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 FAM84AQ96KN4 292 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 KREMEN1Q96MU8 473 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 EIF3CQ99613 913 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 PI4K2AQ9BTU6 479 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 IFIH1Q9BYX4 1025 aaKnown RBP12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 C11orf49Q9H6J7 331 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 VRTNQ9H8Y1 702 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 UBN1Q9NPG3 1134 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 DPP3Q9NY33 737 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 GIT1Q9Y2X7 761 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 TANC1Q9C0D5 1861 aa12.86□□□□□ -0.35
TM9SF4-206ENST00000479591 GOLGA6L9A6NEM1 432 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 FOXN3O00409 490 aaPredicted RBP12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 EVI5O60447 810 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 GFPT2O94808 682 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 CLSTN1O94985 981 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 KRT19P08727 400 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 P4HA1P13674 534 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 CYP3A5P20815 502 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 MYL6P60660 151 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 KRT83P78385 493 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 ARID5AQ03989 594 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 CUL2Q13617 745 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 MBTPS1Q14703 1052 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 MTF1Q14872 753 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 ZNF699Q32M78 642 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 TRIM60Q495X7 471 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 TOGARAM2Q6ZUX3 1019 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 FAM71AQ8IYT1 594 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 CCAR2Q8N163 923 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 APBB2Q92870 758 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 ZMAT2Q96NC0 199 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 ADAM2Q99965 735 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 OSBPL7Q9BZF2 842 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 XYLT2Q9H1B5 865 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 RNF39Q9H2S5 420 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 HAUS4Q9H6D7 363 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms