RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 SLC45A1Q9Y2W3 748 aa4.43□□□□□ -1.7
USP25-208ENST00000478932 ARID2Q68CP9 1835 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ESYT3A0FGR9 886 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 TMEM110-MUSTN1A8MSY1 372 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 BTNL10A8MVZ5 291 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 RTN2O75298 545 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 KIF4AO95239 1232 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 KRT19P08727 400 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 TMEM253P0C7T8 217 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ARF4P18085 180 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 ANXA13P27216 316 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PDE6CP51160 858 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 NOP14P78316 857 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 CDR2Q01850 454 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MBTD1Q05BQ5 628 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CKAP4Q07065 602 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 MCL1Q07820 350 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CUL2Q13617 745 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MESDQ14696 234 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 DGKDQ16760 1214 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 DUOXA2Q1HG44 320 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 BEND6Q5SZJ8 279 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 OLFML2BQ68BL8 750 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MTHFD1LQ6UB35 978 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 TSHZ1Q6ZSZ6 1077 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 SLFN11Q7Z7L1 901 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PASD1Q8IV76 773 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 FMNL3Q8IVF7 1028 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 SLAIN1Q8ND83 568 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 GTF3C2Q8WUA4 911 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 SPOCK2Q92563 424 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ALG3Q92685 438 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CYFIP2Q96F07 1278 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CDT1Q9H211 546 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CDHR5Q9HBB8 845 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CPSF3Q9UKF6 684 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 INTUQ9ULD6 942 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 L1RE1Q9UN81 338 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 NR2E1Q9Y466 385 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 HES2Q9Y543 173 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PCDHB2Q9Y5E7 798 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ALG6Q9Y672 507 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 LOC102724159A0A0B4J2E5 919 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 RBM47A0AV96 593 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 KIAA0391O15091 583 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 GAS2O43903 313 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 GLI1P08151 1106 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MMP3P08254 477 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 GZMAP12544 262 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ITGA4P13612 1032 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ACO1P21399 889 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 TMOD1P28289 359 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MARCKSL1P49006 195 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 TUBB4BP68371 445 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 GPC5P78333 572 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ZNF200P98182 395 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 BEX3Q00994 111 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ZNF211Q13398 564 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 TFDP1Q14186 410 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PWP2Q15269 919 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 GRIK4Q16099 956 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 IFI16Q16666 785 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 WDR72Q3MJ13 1102 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 DAB2IPQ5VWQ8 1189 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 NAA35Q5VZE5 725 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 IQSEC1Q6DN90 963 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 AADACL2Q6P093 401 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MPZL3Q6UWV2 235 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 SCARA5Q6ZMJ2 495 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 BRSK2Q8IWQ3 736 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 KLHL7Q8IXQ5 586 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 EFCAB13Q8IY85 973 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 EXOC8Q8IYI6 725 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 OR6J1Q8NGC5 347 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 LMBR1Q8WVP7 490 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 TAF4BQ92750 862 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 KRT35Q92764 455 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 RPGRIP1Q96KN7 1286 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 KRT12Q99456 494 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 JPH2Q9BR39 696 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 CXCL16Q9H2A7 254 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 OGFRQ9NZT2 677 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 NXF1Q9UBU9 619 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 TSKSQ9UJT2 592 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 PCDHB4Q9Y5E5 795 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 TRIP12Q14669 1992 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 A0A0A6YYK5 440 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 SLC15A5A6NIM6 579 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 A6NJR5 290 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MAGEB2O15479 319 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 MEFVO15553 781 aaPredicted RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 ASAP2O43150 1006 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 ZC3H11AO75152 810 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP25-208ENST00000478932 ASS1P00966 412 aaKnown RBP4.42□□□□□ -1.7
USP25-208ENST00000478932 FGGP02679 453 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 NFICP08651 508 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 CLTAP09496 248 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 HOXC6P09630 235 aa4.42□□□□□ -1.7
USP25-208ENST00000478932 STAG3L1P0CL83 205 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms