RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ANGPTL3Q9Y5C1 460 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 KIF1AQ12756 1690 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 H3BRJ5 948 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 VWA5AO00534 786 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 RPS6KA5O75582 802 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 SLITRK3O94933 977 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 SMAD1Q15797 465 aaKnown RBP15.02□□□□□ -0.01
NPHP4-208ENST00000478423 ZNF449Q6P9G9 518 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 DDX42Q86XP3 938 aaKnown RBP eCLIP15.02□□□□□ -0.01
NPHP4-208ENST00000478423 HPDLQ96IR7 371 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 TTC1Q99614 292 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 SPATC1LQ9H0A9 340 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 L2HGDHQ9H9P8 463 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 ZFYVE28Q9HCC9 887 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 PHF2O75151 1096 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 NAMPTP43490 491 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 CDK17Q00537 523 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 PIGHQ14442 188 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 BTBD8Q5XKL5 378 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 CDKL3Q8IVW4 592 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 USP38Q8NB14 1042 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 RIN2Q8WYP3 895 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 C9orf72Q96LT7 481 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 POP1Q99575 1024 aaKnown RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 EPHX2P34913 555 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 HIF1AQ16665 826 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 TAS1R2Q8TE23 839 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 FAM118BQ9BPY3 351 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 TRIM56Q9BRZ2 755 aaKnown RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 A0A0G2JND7 137 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 BRD2P25440 801 aaKnown RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 DSG3P32926 999 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 SOX10P56693 466 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 LRRC14Q15048 493 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 PGM5Q15124 567 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 TAF1BQ53T94 588 aaPredicted RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 C2CD6Q53TS8 623 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 SH2D4BQ5SQS7 431 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 ATG16L1Q676U5 607 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 PDCD7Q8N8D1 485 aaKnown RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 CELF4Q9BZC1 486 aaKnown RBP15.01□□□□□ -0.01
NPHP4-208ENST00000478423 CARD9Q9H257 536 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 VPS11Q9H270 941 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 MROH8Q9H579 483 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 INTUQ9ULD6 942 aa15.01□□□□□ -0.01
NPHP4-208ENST00000478423 EML1O00423 815 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 NOL3O60936 208 aaKnown RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 ITGB3P05106 788 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 FKBP1AP62942 108 aaKnown RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 CUL2Q13617 745 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 SH2D3CQ8N5H7 860 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15□□□□□ -0.011e-11■■■■■ 94.4
NPHP4-208ENST00000478423 DUSP9Q99956 384 aaKnown RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 SPON2Q9BUD6 331 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 MRIQ9BWK5 157 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 UBN1Q9NPG3 1134 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 WDR70Q9NW82 654 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 RRN3P2A6NIE6 340 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 CD4P01730 458 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 ZFXP17010 805 aaPredicted RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 GARTP22102 1010 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 CACNB2Q08289 660 aaPredicted RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 E2F4Q16254 413 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 ZNF677Q86XU0 584 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 JAMLQ86YT9 394 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 PDCD6IPQ8WUM4 868 aaKnown RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 PACSIN1Q9BY11 444 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 CYP2C19P33261 490 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 STX1BP61266 288 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 DBN1Q16643 649 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 JADE1Q6IE81 842 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 MKL1Q969V6 931 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 GCNAQ96QF7 691 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 GMNCA6NCL1 334 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 APOL1O14791 398 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 CTIFO43310 598 aaKnown RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 APRTP07741 180 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 VIL1P09327 827 aaKnown RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 SERPINB6P35237 376 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 HERVK_113P62684 666 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 SYCP2LQ5T4T6 812 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 SV2AQ7L0J3 742 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 UBA3Q8TBC4 463 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 DHX38Q92620 1227 aaKnown RBP15□□□□□ -0.01
NPHP4-208ENST00000478423 RBM15Q96T37 977 aaKnown RBP eCLIP15□□□□□ -0.018e-10■■■■■ 32.2
NPHP4-208ENST00000478423 TRAIPQ9BWF2 469 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 ADAM33Q9BZ11 813 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 MTMR12Q9C0I1 747 aa15□□□□□ -0.01
NPHP4-208ENST00000478423 ZBTB39O15060 712 aa14.99□□□□□ -0.01
NPHP4-208ENST00000478423 SGPL1O95470 568 aa14.99□□□□□ -0.01
NPHP4-208ENST00000478423 S100BP04271 92 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-208ENST00000478423 SLC8A1P32418 973 aa14.99□□□□□ -0.01
NPHP4-208ENST00000478423 CRY2Q49AN0 593 aa14.99□□□□□ -0.01
NPHP4-208ENST00000478423 TRIM68Q6AZZ1 485 aa14.99□□□□□ -0.01
NPHP4-208ENST00000478423 WDR75Q8IWA0 830 aaKnown RBP14.99□□□□□ -0.01
NPHP4-208ENST00000478423 TRIM55Q9BYV6 548 aa14.99□□□□□ -0.01
NPHP4-208ENST00000478423 DISP2A7MBM2 1401 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 564.5 ms