RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PIAS3Q9Y6X2 628 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 ATG2BQ96BY7 2078 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 SPAG17Q6Q759 2223 aa7.35□□□□□ -1.23
RTFDC1-206ENST00000477485 KMT2BQ9UMN6 2715 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 MAP1BP46821 2468 aaKnown RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 ZNF197O14709 1029 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 LILRB5O75023 590 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 MED24O75448 989 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 LYPLA2O95372 231 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CPB1P15086 417 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 GJA1P17302 382 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 IGFBP6P24592 240 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 MCM4P33991 863 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 MCM7P33993 719 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 NAMPTP43490 491 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CCR3P51677 355 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 KPNA1P52294 538 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 ROR1Q01973 937 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 SIM2Q14190 667 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 PPP2R5AQ15172 486 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 ZNF568Q3ZCX4 644 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CTXN3Q4LDR2 81 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 FAM78AQ5JUQ0 283 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 ATF7IP2Q5U623 682 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CDCA2Q69YH5 1023 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 PADI6Q6TGC4 694 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CEP68Q76N32 757 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 C3orf58Q8NDZ4 430 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 TTC8Q8TAM2 541 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 ERMNQ8TAM6 284 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CSGALNACT1Q8TDX6 532 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 BSNDQ8WZ55 320 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 IRF7Q92985 503 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CLDN23Q96B33 292 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 TCEAL4Q96EI5 215 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 ZNF512Q96ME7 567 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 UROC1Q96N76 676 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 NACC1Q96RE7 527 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 CCDC94Q9BW85 323 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 FAM126AQ9BYI3 521 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 FZD8Q9H461 694 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 LMAN1LQ9HAT1 526 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 TUFT1Q9NNX1 390 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 PRMT8Q9NR22 394 aaPredicted RBP7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 TPCN1Q9ULQ1 816 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 INSL5Q9Y5Q6 135 aa7.34□□□□□ -1.23
RTFDC1-206ENST00000477485 EML5Q05BV3 1969 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 GPR179Q6PRD1 2367 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 EPG5Q9HCE0 2579 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 WDR27A2RRH5 827 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 SLC38A8A6NNN8 435 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 CCDC169A6NNP5 214 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 BTBD18B2RXH4 712 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 CHURC1-FNTBB4DL54 471 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 H7C4K7 107 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 ACKR2O00590 384 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 PODXLO00592 558 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 WNT7AO00755 349 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 ZNF263O14978 683 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 PFKFB2O60825 505 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 EDN1P05305 212 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 POU2F2P09086 479 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 PSMC3P17980 439 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 CCNE1P24864 410 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 VIPR2P41587 438 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 MATR3P43243 847 aaKnown RBP eCLIP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 FNTBP49356 437 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 RBM25P49756 843 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 SATB1Q01826 763 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 TWF1Q12792 350 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 SRSF5Q13243 272 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 GNL2Q13823 731 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 NAB2Q15742 525 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 UPP1Q16831 310 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 FAM187BQ17R55 369 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 LAIR1Q6GTX8 287 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 VITQ6UXI7 678 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 CATSPER3Q86XQ3 398 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 GPIHBP1Q8IV16 184 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 DIS3L2Q8IYB7 885 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 HS6ST3Q8IZP7 471 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 NECAB1Q8N987 351 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 ZNF461Q8TAF7 563 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 NETO1Q8TDF5 533 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 PPP1R10Q96QC0 940 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 TCHPQ9BT92 498 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 TM6SF1Q9BZW5 370 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 ZNF334Q9HCZ1 680 aaPredicted RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 ASAH2Q9NR71 780 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 TOPORSQ9NS56 1045 aaPredicted RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 BACE2Q9Y5Z0 518 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 TPRP12270 2363 aaKnown RBP7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 ACACBO00763 2458 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 DENND4CQ5VZ89 1909 aa7.33□□□□□ -1.24
RTFDC1-206ENST00000477485 TSC2P49815 1807 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SMIM28A0A1B0GU29 152 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 TMEM189-UBE2V1I3L0A0 370 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 K7ERI5 159 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms