RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CASS4Q9NQ75 786 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 MOCS1Q9NZB8 636 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 SLC23A1Q9UHI7 598 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 DNM3Q9UQ16 869 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 TARBP1Q13395 1621 aaKnown RBP5.56□□□□□ -1.52
UBR3-209ENST00000477461 GPANK1O95872 356 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 VIL1P09327 827 aaKnown RBP5.56□□□□□ -1.52
UBR3-209ENST00000477461 MTHFD2P13995 350 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 FDXRP22570 491 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 PCSK1P29120 753 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 SOX5P35711 763 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 GPR3P46089 330 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 MASP1P48740 699 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 CXADRP78310 365 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 SP5Q6BEB4 398 aaPredicted RBP5.56□□□□□ -1.52
UBR3-209ENST00000477461 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 PPM1NQ8N819 430 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 DPF2Q92785 391 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 MARS2Q96GW9 593 aaKnown RBP5.56□□□□□ -1.52
UBR3-209ENST00000477461 AHCYL2Q96HN2 611 aaKnown RBP5.56□□□□□ -1.52
UBR3-209ENST00000477461 GSTO2Q9H4Y5 243 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 LANCL2Q9NS86 450 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 MTO1Q9Y2Z2 717 aaKnown RBP5.56□□□□□ -1.52
UBR3-209ENST00000477461 ABCA10Q8WWZ4 1543 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 KIF27Q86VH2 1401 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 WDR97A6NE52 1622 aa5.56□□□□□ -1.52
UBR3-209ENST00000477461 TCRBV7S2A1N4TA0A589 114 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 FBLP22087 321 aaKnown RBP5.55□□□□□ -1.52
UBR3-209ENST00000477461 CD38P28907 300 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 MCAMP43121 646 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 FOXR2Q6PJQ5 311 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 ARHGEF25Q86VW2 580 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 DRC7Q8IY82 874 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 BOLLQ8N9W6 283 aaKnown RBP5.55□□□□□ -1.52
UBR3-209ENST00000477461 CAGE1Q8TC20 777 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 HOXB13Q92826 284 aaPredicted RBP5.55□□□□□ -1.52
UBR3-209ENST00000477461 RNPEPQ9H4A4 650 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 TMEM140Q9NV12 185 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 TBCCD1Q9NVR7 557 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 TLK1Q9UKI8 766 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 COX11Q9Y6N1 276 aa5.55□□□□□ -1.52
UBR3-209ENST00000477461 MAST3O60307 1309 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 BRINP1O60477 761 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 ERN1O75460 977 aaKnown RBP5.54□□□□□ -1.52
UBR3-209ENST00000477461 PRKD3O94806 890 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 GUCY1A2P33402 732 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 SLC6A9P48067 706 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 BLOC1S1P78537 153 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 MALLQ13021 153 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 ZKSCAN2Q63HK3 967 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.54□□□□□ -1.52
UBR3-209ENST00000477461 Q6ZNX1 250 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 FAM9AQ8IZU1 332 aaPredicted RBP5.54□□□□□ -1.52
UBR3-209ENST00000477461 OR2I1PQ8NGU4 316 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 COG1Q8WTW3 980 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 PTCD3Q96EY7 689 aaKnown RBP5.54□□□□□ -1.52
UBR3-209ENST00000477461 ORAI2Q96SN7 254 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 AIFM2Q9BRQ8 373 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 GALNT9Q9HCQ5 603 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 EEA1Q15075 1411 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 TDRD9Q8NDG6 1382 aaKnown RBP5.54□□□□□ -1.52
UBR3-209ENST00000477461 SBNO2Q9Y2G9 1366 aa5.54□□□□□ -1.52
UBR3-209ENST00000477461 GAPVD1Q14C86 1478 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 KIAA0391O15091 583 aaKnown RBP5.53□□□□□ -1.52
UBR3-209ENST00000477461 CKBP12277 381 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 GCSHP23434 173 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 CNGA1P29973 690 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 NOMO3P69849 1222 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 SIM1P81133 766 aaPredicted RBP5.53□□□□□ -1.52
UBR3-209ENST00000477461 ZNF169Q14929 603 aaPredicted RBP5.53□□□□□ -1.52
UBR3-209ENST00000477461 NOMO2Q5JPE7 1267 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 ZNF362Q5T0B9 420 aaPredicted RBP5.53□□□□□ -1.52
UBR3-209ENST00000477461 ARMC6Q6NXE6 501 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 KRT26Q7Z3Y9 468 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 AFAP1L2Q8N4X5 818 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 ZGPATQ8N5A5 531 aaKnown RBP5.53□□□□□ -1.52
UBR3-209ENST00000477461 RAB24Q969Q5 203 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 LRFN3Q9BTN0 628 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 DUSP26Q9BV47 211 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 SPATA5L1Q9BVQ7 753 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 CCM2LQ9NUG4 571 aaPredicted RBP5.53□□□□□ -1.52
UBR3-209ENST00000477461 EIF4G3O43432 1585 aaKnown RBP5.53□□□□□ -1.52
UBR3-209ENST00000477461 PBRM1Q86U86 1689 aa5.53□□□□□ -1.52
UBR3-209ENST00000477461 ABCA5Q8WWZ7 1642 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 AQRO60306 1485 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBR3-209ENST00000477461 MGST3O14880 152 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 GPR32O75388 356 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 ENDOD1O94919 500 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 EYA4O95677 639 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 AMY1AP04745 511 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 CYP2A13Q16696 494 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 ANO4Q32M45 955 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 OTUD7BQ6GQQ9 843 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 FAM43AQ8N2R8 423 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 FAM98AQ8NCA5 519 aaKnown RBP5.52□□□□□ -1.53
UBR3-209ENST00000477461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBR3-209ENST00000477461 WDR66Q8TBY9 1149 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 TBC1D15Q8TC07 691 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 BOD1Q96IK1 185 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 UNKLQ9H9P5 680 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms