RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 GJA9P57773 515 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 KCNA1Q09470 495 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 FSCN1Q16658 493 aaKnown RBP8.41□□□□□ -1.06
RBM39-230ENST00000476806 AMHR2Q16671 573 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 DUOXA2Q1HG44 320 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 EPC2Q52LR7 807 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 CTU1Q7Z7A3 348 aaKnown RBP8.41□□□□□ -1.06
RBM39-230ENST00000476806 RNF180Q86T96 592 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 RPAINQ86UA6 219 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 SESTD1Q86VW0 696 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 RHOT2Q8IXI1 618 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 C7orf31Q8N865 590 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 CEP112Q8N8E3 955 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 USP38Q8NB14 1042 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 MSANTD4Q8NCY6 345 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 ASAP3Q8TDY4 903 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 SECISBP2LQ93073 1101 aaKnown RBP8.41□□□□□ -1.06
RBM39-230ENST00000476806 EEF2KMTQ96G04 330 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 NOX5Q96PH1 765 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 ACO2Q99798 780 aaKnown RBP8.41□□□□□ -1.06
RBM39-230ENST00000476806 FAM213AQ9BRX8 229 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 CCDC94Q9BW85 323 aaPredicted RBP8.41□□□□□ -1.06
RBM39-230ENST00000476806 PLVAPQ9BX97 442 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 MIS12Q9H081 205 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 UPF3AQ9H1J1 476 aaKnown RBP8.41□□□□□ -1.06
RBM39-230ENST00000476806 NLRC4Q9NPP4 1024 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 TRMT1Q9NXH9 659 aaKnown RBP8.41□□□□□ -1.06
RBM39-230ENST00000476806 ANKFY1Q9P2R3 1169 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 GJD2Q9UKL4 321 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 C2CD2Q9Y426 696 aa8.41□□□□□ -1.06
RBM39-230ENST00000476806 ADGRA3Q8IWK6 1321 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 ARHGEF37A1IGU5 675 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 MOXD2PA6NHM9 499 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 HAS3O00219 553 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 DYNC1I1O14576 645 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 SRGAP2CP0DJJ0 459 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 MYBL1P10243 752 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 SKIP12755 728 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 CYBAP13498 195 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 DESP17661 470 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 TCP1P17987 556 aaKnown RBP8.4□□□□□ -1.06
RBM39-230ENST00000476806 PROZP22891 400 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 GTF2F1P35269 517 aaKnown RBP eCLIP8.4□□□□□ -1.06
RBM39-230ENST00000476806 MAGEA1P43355 309 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 JAM2P57087 298 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 SNX16P57768 344 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 GNG11P61952 73 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 PTK2Q05397 1052 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 BIRC3Q13489 604 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 TRPC3Q13507 836 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 KIAA0753Q2KHM9 967 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 SGSM1Q2NKQ1 1148 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 ZACNQ401N2 412 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 TRIM50Q86XT4 487 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 LINC01465Q8N7H1 131 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 MYRIPQ8NFW9 859 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 CTNNBL1Q8WYA6 563 aaPredicted RBP8.4□□□□□ -1.06
RBM39-230ENST00000476806 BSNDQ8WZ55 320 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 ZFP42Q96MM3 310 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 NAPGQ99747 312 aaPredicted RBP8.4□□□□□ -1.06
RBM39-230ENST00000476806 TSEN34Q9BSV6 310 aaKnown RBP8.4□□□□□ -1.06
RBM39-230ENST00000476806 TRIM6Q9C030 488 aaPredicted RBP8.4□□□□□ -1.06
RBM39-230ENST00000476806 PCIF1Q9H4Z3 704 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 PDGFCQ9NRA1 345 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 DNAJC12Q9UKB3 198 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 JRKLQ9Y4A0 524 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 SQORQ9Y6N5 450 aa8.4□□□□□ -1.06
RBM39-230ENST00000476806 TMEM150BA6NC51 233 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 LRRIQ3A6PVS8 624 aaPredicted RBP8.39□□□□□ -1.07
RBM39-230ENST00000476806 ZBTB42B2RXF5 422 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 PJA2O43164 708 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
RBM39-230ENST00000476806 IGHA2P01877 340 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 C6orf222P0C671 652 aaPredicted RBP8.39□□□□□ -1.07
RBM39-230ENST00000476806 SMIM10L2AP0DMW4 78 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 SMIM10L2BP0DMW5 78 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 DLATP10515 647 aaKnown RBP8.39□□□□□ -1.07
RBM39-230ENST00000476806 CYP2C9P11712 490 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 GZMAP12544 262 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 ADSSP30520 456 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 RAB27AP51159 221 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 CLCN3P51790 818 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 MBTD1Q05BQ5 628 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 DRAP1Q14919 205 aaPredicted RBP8.39□□□□□ -1.07
RBM39-230ENST00000476806 STILQ15468 1287 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 NAB2Q15742 525 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 WHAMMP3Q1A5X7 153 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 ALKBH5Q6P6C2 394 aaKnown RBP8.39□□□□□ -1.07
RBM39-230ENST00000476806 SLC27A1Q6PCB7 646 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 WDR59Q6PJI9 974 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 RAD9BQ6WBX8 426 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 CBWD2Q8IUF1 395 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 REXO1L1PQ8IX06 675 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 PPM1KQ8N3J5 372 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 RAET1EQ8TD07 263 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 ZNF592Q92610 1267 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 RUBCNQ92622 972 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 COPS5Q92905 334 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 CRACR2AQ9BSW2 395 aa8.39□□□□□ -1.07
RBM39-230ENST00000476806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms