RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ZNF277Q9NRM2 450 aaPredicted RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 ZC3H7BQ9UGR2 993 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 ERVK-11Q9UQG0 969 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 IPPQ9Y573 584 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 PCDHGA11Q9Y5H2 935 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 CD2APQ9Y5K6 639 aa4.4□□□□□ -1.71
CD55-208ENST00000476590 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.4□□□□□ -1.71
CD55-208ENST00000476590 CHD2O14647 1828 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 TUBGCP6Q96RT7 1819 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 PCDH11XQ9BZA7 1347 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 SETD1AO15047 1707 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 GRIN2BQ13224 1484 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 KIAA0232Q92628 1395 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 DISP3Q9P2K9 1392 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 ZSCAN5BA6NJL1 495 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 GCOM1H8Y6P7 765 aaPredicted RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 DYRK3O43781 588 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 EXTL3O43909 919 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 RNGTTO60942 597 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 KATNA1O75449 491 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 RHOBTB3O94955 611 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 KLHL2O95198 593 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 OR5F1O95221 314 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 MYZAPP0CAP1 466 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 UBTFL6P0CB48 400 aaPredicted RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 ZNF12P17014 697 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 TNFAIP3P21580 790 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 CDH3P22223 829 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 TCEA1P23193 301 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 TBXAS1P24557 533 aaPredicted RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 PPARGP37231 505 aaPredicted RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 VAV2P52735 878 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 EPHB1P54762 984 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 MLLT6P55198 1093 aaPredicted RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 SNX16P57768 344 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 TMF1P82094 1093 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 PPP2R2BQ00005 443 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 EHHADHQ08426 723 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 NR1H3Q13133 447 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 DSC3Q14574 896 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 TGFBIQ15582 683 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 CCDC6Q16204 474 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 TMEM266Q2M3C6 531 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 DPCR1Q3MIW9 517 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 RESP18Q5W5W9 173 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 PAPD7Q5XG87 772 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 NIPAL1Q6NVV3 410 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 FAM122CQ6P4D5 195 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 KIF6Q6ZMV9 814 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 KRT28Q7Z3Y7 464 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 CYP2U1Q7Z449 544 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 DGKHQ86XP1 1220 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 AGGF1Q8N302 714 aaeCLIP4.39□□□□□ -1.71
CD55-208ENST00000476590 ENGASEQ8NFI3 743 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 LRRC8CQ8TDW0 803 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 RUFY2Q8WXA3 655 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 DPF2Q92785 391 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 INTS12Q96CB8 462 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 ZNF496Q96IT1 587 aaPredicted RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 USP28Q96RU2 1077 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 DDX23Q9BUQ8 820 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 MRPL1Q9BYD6 325 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 FOXP3Q9BZS1 431 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 VPS16Q9H269 839 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 CAAP1Q9H8G2 361 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 CD93Q9NPY3 652 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 KCNN3Q9UGI6 736 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 KIAA1024Q9UPX6 916 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 IFT52Q9Y366 437 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 TACC3Q9Y6A5 838 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 DAPK1P53355 1430 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 C9orf84Q5VXU9 1444 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 TARBP1Q13395 1621 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 CDK13Q14004 1512 aaKnown RBP4.39□□□□□ -1.71
CD55-208ENST00000476590 CROCC2H7BZ55 1655 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 SHPRHQ149N8 1683 aa4.39□□□□□ -1.71
CD55-208ENST00000476590 A0A1W2PRQ8 180 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 B8ZZF3 427 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CPLX1O14810 134 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 KLF4O43474 513 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 AKAP10O43572 662 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SULT1B1O43704 296 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TCEA3O75764 348 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ATP5HO75947 161 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 BAIAP3O94812 1187 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 YEATS4O95619 227 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 AGR2O95994 175 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 OCM2P0CE71 109 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 OCMP0CE72 109 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 ZCCHC18P0CG32 403 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ATP1A3P13637 1013 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CCNB1P14635 433 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CPA1P15085 419 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ADSLP30566 484 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 KRT20P35900 424 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 EPS15P42566 896 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 IST1P53990 364 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 PLTPP55058 493 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ADKP55263 362 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 HSD17B7P56937 341 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms