RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 BOLA2-SMG1P6H3BVE0 249 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 BAG2O95816 211 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 SMIM18P0DKX4 95 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 ABCB4P21439 1286 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 PDK3Q15120 406 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 UGT2A3Q6UWM9 527 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 RIPOR1Q6ZS17 1223 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 KRT25Q7Z3Z0 450 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 TDRPQ86YL5 185 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 SLC13A5Q86YT5 568 aaPredicted RBP14.65□□□□□ -0.06
HDAC1-206ENST00000476391 CEP70Q8NHQ1 597 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 OLIG1Q8TAK6 271 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 ZFRQ96KR1 1074 aaKnown RBP14.65□□□□□ -0.06
HDAC1-206ENST00000476391 BHMT2Q9H2M3 363 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 TRABDQ9H4I3 376 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 PLK2Q9NYY3 685 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 CLPTM1O96005 669 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 TFAP2AP05549 437 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 ARFIP2P53365 341 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 PLCB3Q01970 1234 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 PUM3Q15397 648 aaKnown RBP14.64□□□□□ -0.07
HDAC1-206ENST00000476391 LETM2Q2VYF4 491 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 ANKRD20A4Q4UJ75 823 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 BORAQ6PGQ7 559 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 TREML1Q86YW5 311 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 ARL10Q8N8L6 244 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 MIGA1Q8NAN2 632 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 SDR42E1Q8WUS8 393 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 KRT35Q92764 455 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 PANX3Q96QZ0 392 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 TRAIPQ9BWF2 469 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 TRIM55Q9BYV6 548 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 KCTD10Q9H3F6 313 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 THEGQ9P2T0 379 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
HDAC1-206ENST00000476391 PGM3O95394 542 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 CHRNB2P17787 502 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 KCNJ1P48048 391 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 CDK16Q00536 496 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 KRT17Q04695 432 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 TRIM28Q13263 835 aaKnown RBP14.64□□□□□ -0.07
HDAC1-206ENST00000476391 SIX1Q15475 284 aaPredicted RBP14.64□□□□□ -0.07
HDAC1-206ENST00000476391 RAPH1Q70E73 1250 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 PATL1Q86TB9 770 aaKnown RBP14.64□□□□□ -0.07
HDAC1-206ENST00000476391 SFR1Q86XK3 245 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 GLYCTKQ8IVS8 523 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 MORC4Q8TE76 937 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 FAM172AQ8WUF8 416 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 DNAJC19Q96DA6 116 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 ARHGEF26Q96DR7 871 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 TCHPQ9BT92 498 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 STK33Q9BYT3 514 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 C17orf75Q9HAS0 396 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 ASIC3Q9UHC3 531 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 ASAP1Q9ULH1 1129 aa14.64□□□□□ -0.07
HDAC1-206ENST00000476391 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.64□□□□□ -0.07
HDAC1-206ENST00000476391 SH3PXD2BA1X283 911 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 NPM3O75607 178 aaKnown RBP14.63□□□□□ -0.07
HDAC1-206ENST00000476391 SERPINB7O75635 380 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 TM7SF2O76062 418 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 CA4P22748 312 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 RPA3P35244 121 aaPredicted RBP14.63□□□□□ -0.07
HDAC1-206ENST00000476391 HALP42357 657 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.073e-7■■■□□ 15.4
HDAC1-206ENST00000476391 ZBTB16Q05516 673 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 TCEAL1Q15170 157 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 NONOQ15233 471 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC1-206ENST00000476391 EPHA7Q15375 998 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 MAP7D1Q3KQU3 841 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 MMEL1Q495T6 779 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 RC3H1Q5TC82 1133 aaKnown RBP14.63□□□□□ -0.07
HDAC1-206ENST00000476391 NEK8Q86SG6 692 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 HSPBAP1Q96EW2 488 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 VPS50Q96JG6 964 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 BTBD9Q96Q07 612 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 WNT8AQ9H1J5 351 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 ARPP21Q9UBL0 812 aaPredicted RBP14.63□□□□□ -0.07
HDAC1-206ENST00000476391 DCTN4Q9UJW0 460 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 PPM1HQ9ULR3 514 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 COG5Q9UP83 839 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 FADS3Q9Y5Q0 445 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 CCDC160A6NGH7 325 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 MATN2O00339 956 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 P4HA2O15460 535 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 SORBS3O60504 671 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 FGFR2P21802 821 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 ITGA8P53708 1063 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 PPIDQ08752 370 aaKnown RBP14.63□□□□□ -0.07
HDAC1-206ENST00000476391 UBE4AQ14139 1066 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 SLC1A5Q15758 541 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 BCL2A1Q16548 175 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 DHDDSQ86SQ9 333 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 IFNL2Q8IZJ0 200 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 RFWD2Q8NHY2 731 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 RAB34Q9BZG1 259 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 KLHL4Q9C0H6 718 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 THAP2Q9H0W7 228 aa14.63□□□□□ -0.07
HDAC1-206ENST00000476391 BARHL2Q9NY43 387 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms