RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 KHDC1Q4VXA5 237 aaKnown RBP4.89□□□□□ -1.63
VPS13D-207ENST00000476169 KLHDC7AQ5VTJ3 777 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 GADL1Q6ZQY3 521 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 C4orf50Q6ZRC1 276 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 RFX8Q6ZV50 586 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 Q6ZVL8 140 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 HEATR3Q7Z4Q2 680 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 CLEC14AQ86T13 490 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 PQLC1Q8N2U9 271 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 SH2D3CQ8N5H7 860 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 PLBD2Q8NHP8 589 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 ZSCAN18Q8TBC5 510 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-207ENST00000476169 CCHCR1Q8TD31 782 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 GFM2Q969S9 779 aaKnown RBP4.89□□□□□ -1.63
VPS13D-207ENST00000476169 TMX3Q96JJ7 454 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 SAMD11Q96NU1 681 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 RMDN3Q96TC7 470 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 PTPN18Q99952 460 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 PDCD2LQ9BRP1 358 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 EPB41L4AQ9HCS5 686 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-207ENST00000476169 TLR9Q9NR96 1032 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 CNNM1Q9NRU3 951 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 DACT1Q9NYF0 836 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 FAM53CQ9NYF3 392 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 CPA4Q9UI42 421 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 SIK3Q9Y2K2 1263 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 VWA7Q9Y334 891 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 PCDHA3Q9Y5H8 950 aa4.89□□□□□ -1.63
VPS13D-207ENST00000476169 EYA2O00167 538 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 ANP32CO43423 234 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 FGF18O76093 207 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 ALDH1A2O94788 518 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 CNOT4O95628 575 aaKnown RBP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 JUNBP17275 347 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 PDIA3P30101 505 aaKnown RBP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 RXRGP48443 463 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 ADAM15Q13444 863 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 RAB39AQ14964 217 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 MLANAQ16655 118 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 TIGD6Q17RP2 521 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 CCDC96Q2M329 555 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 MPEG1Q2M385 716 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 ARL13BQ3SXY8 428 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 NUDT10Q8NFP7 164 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 OR7D4Q8NG98 312 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 BRI3BPQ8WY22 251 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 CYFIP2Q96F07 1278 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 NUDT11Q96G61 164 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 SLC35A4Q96G79 324 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 FAM167AQ96KS9 214 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 MRGPRX4Q96LA9 322 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 VRK1Q99986 396 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 FAM167BQ9BTA0 163 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 SORBS1Q9BX66 1292 aaKnown RBP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 TMEM120AQ9BXJ8 343 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 UNKQ9C0B0 810 aaKnown RBP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 MAGEH1Q9H213 219 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 LDAHQ9H6V9 325 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 L2HGDHQ9H9P8 463 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 BCO1Q9HAY6 547 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 ATP6V0A4Q9HBG4 840 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 BLOC1S4Q9NUP1 217 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 ABCF2Q9UG63 623 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 FAM184BQ9ULE4 1060 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 NOL7Q9UMY1 257 aaKnown RBP4.88□□□□□ -1.63
VPS13D-207ENST00000476169 SLC45A1Q9Y2W3 748 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 KAT6BQ8WYB5 2073 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 ITIH6Q6UXX5 1313 aa4.88□□□□□ -1.63
VPS13D-207ENST00000476169 FRS3O43559 492 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 KLHL18O94889 574 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 PLA2G1BP04054 148 aaKnown RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 POLBP06746 335 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 TYRP14679 529 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 ZNF28P17035 718 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 XBP1P17861 261 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 CAPN3P20807 821 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 ELF1P32519 619 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 SREBF1P36956 1147 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 MRE11P49959 708 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 ARL4CP56559 192 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 WNT3AP56704 352 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 DLG4P78352 724 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 NKX6-1P78426 367 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 PCOLCEQ15113 449 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 CNGA2Q16280 664 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 PFKFB4Q16877 469 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 SLC35G1Q2M3R5 365 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 ZACNQ401N2 412 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 PRR31Q5SQ13 230 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 AGAP9Q5VTM2 703 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 TRIM68Q6AZZ1 485 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 ITPRIPL1Q6GPH6 555 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 LARP4Q71RC2 724 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 TBC1D1Q86TI0 1168 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 COLGALT2Q8IYK4 626 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 CACNA2D3Q8IZS8 1091 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 PLA2G15Q8NCC3 412 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 IL31RAQ8NI17 732 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 NUP133Q8WUM0 1156 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms