RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 HOXA2O43364 376 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 PHACTR2O75167 634 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 GTF2H1P32780 548 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 RGS19P49795 217 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 SOX4Q06945 474 aaPredicted RBP13.83□□□□□ -0.2
HLA-F-224ENST00000475996 ZBTB6Q15916 424 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 ZACNQ401N2 412 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 KRT39Q6A163 491 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 SARM1Q6SZW1 724 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 NT5DC4Q86YG4 428 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 ELMO3Q96BJ8 720 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 DPP3Q9NY33 737 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 HCSTQ9UBK5 93 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 UBQLN1Q9UMX0 589 aaKnown RBP13.83□□□□□ -0.2
HLA-F-224ENST00000475996 SLC4A7Q9Y6M7 1214 aa13.83□□□□□ -0.2
HLA-F-224ENST00000475996 SCN1AP35498 2009 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 CASTOR2A6NHX0 329 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 INPPL1O15357 1258 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 CBFA2T2O43439 604 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 XPOTO43592 962 aaKnown RBP13.82□□□□□ -0.2
HLA-F-224ENST00000475996 N4BP1O75113 896 aaKnown RBP13.82□□□□□ -0.2
HLA-F-224ENST00000475996 LRRN2O75325 713 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 DGKIO75912 1065 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 VNN1O95497 513 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 HLA-DRAP01903 254 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 ITGB3P05106 788 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 KRT19P08727 400 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 PIK3CAP42336 1068 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 AP3M2P53677 418 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 RNASELQ05823 741 aaKnown RBP13.82□□□□□ -0.2
HLA-F-224ENST00000475996 GRIK3Q13003 919 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 NR1I3Q14994 352 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 NAB2Q15742 525 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 FKBP15Q5T1M5 1219 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 C15orf39Q6ZRI6 1047 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 TAS1R2Q8TE23 839 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 MTIF3Q9H2K0 278 aaKnown RBP13.82□□□□□ -0.2
HLA-F-224ENST00000475996 TBC1D13Q9NVG8 400 aa13.82□□□□□ -0.2
HLA-F-224ENST00000475996 PPEF2O14830 753 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 B4GALT3O60512 393 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 CLSTN1O94985 981 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 CST3P01034 146 aaPredicted RBP13.81□□□□□ -0.2
HLA-F-224ENST00000475996 POLR2BP30876 1174 aaKnown RBP13.81□□□□□ -0.2
HLA-F-224ENST00000475996 KLK7P49862 253 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 NCOA4Q13772 614 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 SHHQ15465 462 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 GBP6Q6ZN66 633 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 ZNF280BQ86YH2 543 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 RABGGTAQ92696 567 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 RNPC3Q96LT9 517 aaKnown RBP13.81□□□□□ -0.2
HLA-F-224ENST00000475996 PI4K2AQ9BTU6 479 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
HLA-F-224ENST00000475996 SLC38A7Q9NVC3 462 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 GCNT4Q9P109 453 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 SIX4Q9UIU6 781 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
HLA-F-224ENST00000475996 DDHD2O94830 711 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 ATP2A2P16615 1042 aaKnown RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 SLC9A1P19634 815 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 MRE11P49959 708 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 ZNF75DP51815 510 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 TRPC3Q13507 836 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 SYCP1Q15431 976 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 EPC2Q52LR7 807 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 FBXL13Q8NEE6 735 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 ZNF689Q96CS4 500 aaPredicted RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 TSPAN18Q96SJ8 248 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 SLC9A7Q96T83 725 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 YME1L1Q96TA2 773 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 GDF15Q99988 308 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 PAAF1Q9BRP4 392 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 LSM14BQ9BX40 385 aaKnown RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 INTS2Q9H0H0 1204 aaKnown RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 RAB20Q9NX57 234 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 KANSL3Q9P2N6 904 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 ITGA11Q9UKX5 1188 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 AGAP1Q9UPQ3 857 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 P4HA2O15460 535 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 ZC3H11AO75152 810 aaKnown RBP eCLIP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 GJB5O95377 273 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 ADCY5O95622 1261 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 TPM3P06753 285 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 CYP3A5P20815 502 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 MYL6P60660 151 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 APBA1Q02410 837 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 CETN1Q12798 172 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 LRMPQ12912 555 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 TUSC3Q13454 348 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 RASIP1Q5U651 963 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 C9orf57Q5W0N0 161 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 HERC6Q8IVU3 1022 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms