RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 KLK14Q9P0G3 267 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 CNTN3Q9P232 1028 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 FBXL5Q9UKA1 691 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 DNAJC12Q9UKB3 198 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 MYO6Q9UM54 1294 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 INPP5FQ9Y2H2 1132 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 PCDHB7Q9Y5E2 793 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 PCNTO95613 3336 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 LRRC53A6NM62 1247 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 CCP110O43303 1012 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 EFCAB14O75071 495 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 EOMESO95936 686 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 C4BPAP04003 597 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 PFKMP08237 780 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 FERP16591 822 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 CYLC1P35663 651 aaPredicted RBP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 PNPLA4P41247 253 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 FXR1P51114 621 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 KCNMA1Q12791 1236 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 TBX2Q13207 712 aaPredicted RBP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 PLEKHG4Q58EX7 1191 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 GLRA4Q5JXX5 417 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 PDXDC1Q6P996 788 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 CNKSR3Q6P9H4 555 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 ECHDC2Q86YB7 292 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 TMTC1Q8IUR5 882 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 TXLNBQ8N3L3 684 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 DBF4BQ8NFT6 615 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 OR5B17Q8NGF7 314 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 RSPH1Q8WYR4 309 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 TBX21Q9UL17 535 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 AGAP1Q9UPQ3 857 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 COQ4Q9Y3A0 265 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 FHOD1Q9Y613 1164 aa11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 BZW2Q9Y6E2 419 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-202ENST00000474048 PDCD11Q14690 1871 aaKnown RBP11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 ARHGEF37A1IGU5 675 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 NBNO60934 754 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 ZNF623O75123 536 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 TIMP1P01033 207 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 SKILP12757 684 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 KRT5P13647 590 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 EN2P19622 333 aaPredicted RBP11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 CYP3A5P20815 502 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 KCNJ6P48051 423 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 GCNT1Q02742 428 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 ARID5AQ03989 594 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 KLHL30Q0D2K2 578 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 GRIK3Q13003 919 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 DSC3Q14574 896 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 SV2CQ496J9 727 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 C1orf220Q5T0J3 134 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 TTC39CQ8N584 583 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 SMG8Q8ND04 991 aaKnown RBP11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 HPDLQ96IR7 371 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 CCDC42Q96M95 316 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 PI4K2AQ9BTU6 479 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 STK33Q9BYT3 514 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 NIF3L1Q9GZT8 377 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 GANQ9H2C0 597 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 TMEM161AQ9NX61 479 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 KANSL3Q9P2N6 904 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 PTPRJQ12913 1337 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 UMODL1Q5DID0 1318 aa11.04□□□□□ -0.64
PRPF38A-202ENST00000474048 TDRD15B5MCY1 1934 aaKnown RBP11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 SMIM28A0A1B0GU29 152 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 ARL5CA6NH57 179 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 ARHGAP6O43182 974 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 EVI5O60447 810 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 MGEA5O60502 916 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 LRRN2O75325 713 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 AMHP03971 560 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 SERPING1P05155 500 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 KCNE1P15382 129 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 SOX5P35711 763 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 PDE6CP51160 858 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 BPIFB4P59827 614 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 MCCD1P59942 119 aaPredicted RBP11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 MYL6P60660 151 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 GOLGA8FQ08AF8 430 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 GOLGA8DPQ0D2H9 430 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 PPIGQ13427 754 aaKnown RBP eCLIP11.03□□□□□ -0.644e-6■□□□□ 11.3
PRPF38A-202ENST00000474048 CUL2Q13617 745 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 MBTPS1Q14703 1052 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 DRAP1Q14919 205 aaPredicted RBP11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 SPA17Q15506 151 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 IQCEQ6IPM2 695 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 TRAF7Q6Q0C0 670 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 SCARA5Q6ZMJ2 495 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 C15orf39Q6ZRI6 1047 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 MRPL10Q7Z7H8 261 aaKnown RBP11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 C7orf61Q8IZ16 206 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 C1orf127Q8N9H9 656 aa11.03□□□□□ -0.64
PRPF38A-202ENST00000474048 TC2NQ8N9U0 490 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms