RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 BORCS6Q96GS4 357 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 MFSD14AQ96MC6 490 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 FTHL17Q9BXU8 183 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 TRIM6Q9C030 488 aaPredicted RBP8.25□□□□□ -1.09
CCDC93-207ENST00000474006 CDT1Q9H211 546 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 HSD3B7Q9H2F3 369 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 THAP9Q9H5L6 903 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 KIAA1586Q9HCI6 787 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 RGS18Q9NS28 235 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 SNTG2Q9NY99 539 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 CPSF3Q9UKF6 684 aaKnown RBP8.25□□□□□ -1.09
CCDC93-207ENST00000474006 PCDHB2Q9Y5E7 798 aa8.25□□□□□ -1.09
CCDC93-207ENST00000474006 A0A0U1RQF3 1178 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 LRRC10BA6NIK2 292 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 MAPK13O15264 365 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 FAM189A1O60320 539 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 ZNF623O75123 536 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 CLTAP09496 248 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 EPB41P11171 864 aaKnown RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 ATP1A3P13637 1013 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 ZNF18P17022 549 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 IBSPP21815 317 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 AKAP5P24588 427 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 TNFSF9P41273 254 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 TPM4P67936 248 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 IKBKEQ14164 716 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 SNRNP35Q16560 246 aaKnown RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 KYAT1Q16773 422 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 TCP11X2Q5H9J9 407 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 CDKAL1Q5VV42 579 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 SLC24A5Q71RS6 500 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 C16orf59Q7L2K0 433 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 FRMD5Q7Z6J6 570 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 MRPL10Q7Z7H8 261 aaKnown RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 TMEM192Q8IY95 271 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 FAM186BQ8IYM0 893 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 CCDC116Q8IYX3 515 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 CEP120Q8N960 986 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 MRGPRX2Q96LB1 330 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 ACAP3Q96P50 834 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 MKNK1Q9BUB5 465 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 RPF1Q9H9Y2 349 aaKnown RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 METTL14Q9HCE5 456 aaKnown RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 FAM105AQ9NUU6 356 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 MAGEC2Q9UBF1 373 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 PARP2Q9UGN5 583 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 ZMYND8Q9ULU4 1186 aaPredicted RBP8.24□□□□□ -1.09
CCDC93-207ENST00000474006 HES2Q9Y543 173 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 IPPQ9Y573 584 aa8.24□□□□□ -1.09
CCDC93-207ENST00000474006 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 LACTBL1A8MY62 500 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 KCNJ18B7U540 433 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 C9IYK1 514 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 SLC16A3O15427 465 aaKnown RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 MEFVO15553 781 aaPredicted RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 ADRB2P07550 413 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 KRT13P13646 458 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 MTIF2P46199 727 aaKnown RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 POU5F1Q01860 360 aaKnown RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 FPGSQ05932 587 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 CYP24A1Q07973 514 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 PPIGQ13427 754 aaKnown RBP eCLIP8.23□□□□□ -1.098e-7■■□□□ 12.2
CCDC93-207ENST00000474006 KCNJ12Q14500 433 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 HSP90AA2PQ14568 343 aaPredicted RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 OCLNQ16625 522 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 SLC10A6Q3KNW5 377 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 CNKSR3Q6P9H4 555 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 ALKAL1Q6UXT8 129 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 SND1Q7KZF4 910 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 ECHDC2Q86YB7 292 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 FAM114A1Q8IWE2 563 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 PARD3BQ8TEW8 1205 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 LINC01599Q8WXQ3 324 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 LPPQ93052 612 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 CCDC127Q96BQ5 260 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 CNOT6LQ96LI5 555 aaKnown RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 POP1Q99575 1024 aaKnown RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 LBHD1Q9BQE6 289 aaPredicted RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 CCDC94Q9BW85 323 aaPredicted RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 APOL6Q9BWW8 343 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 NXF3Q9H4D5 531 aaKnown RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 IL23AQ9NPF7 189 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 C1orf112Q9NSG2 853 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 RBAKQ9NYW8 714 aaPredicted RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 KLK14Q9P0G3 267 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 ARMCX3Q9UH62 379 aaPredicted RBP8.23□□□□□ -1.09
CCDC93-207ENST00000474006 NR2E3Q9Y5X4 410 aa8.23□□□□□ -1.09
CCDC93-207ENST00000474006 MYH9P35579 1960 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 ABHD14A-ACY1A0A1B0GW23 586 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 GOLGA6L3A6NEY3 463 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 MEIS3P2A8K0S8 358 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 EOMESO95936 686 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 FGBP02675 491 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 CXCL8P10145 99 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 ITGA4P13612 1032 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 EEF1GP26641 437 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 RAB27AP51159 221 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms