RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 IRAK3Q9Y616 596 aa10.33□□□□□ -0.76
GGPS1-204ENST00000471812 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 ZNF318Q5VUA4 2279 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 TRAK2O60296 914 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 BRD1O95696 1058 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 KRT18P05783 430 aaKnown RBP10.32□□□□□ -0.76
GGPS1-204ENST00000471812 THP07101 528 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 MCF2P10911 925 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 TKTP29401 623 aaKnown RBP10.32□□□□□ -0.76
GGPS1-204ENST00000471812 GLUD2P49448 558 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 CDR1P51861 262 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 DSG1Q02413 1049 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 MCL1Q07820 350 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 NOLC1Q14978 699 aaKnown RBP eCLIP10.32□□□□□ -0.76
GGPS1-204ENST00000471812 ENOX2Q16206 610 aaKnown RBP10.32□□□□□ -0.76
GGPS1-204ENST00000471812 FAM171A1Q5VUB5 890 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 PDE12Q6L8Q7 609 aaKnown RBP10.32□□□□□ -0.76
GGPS1-204ENST00000471812 PALB2Q86YC2 1186 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-204ENST00000471812 RPGRIP1Q96KN7 1286 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 CDCA3Q99618 268 aaPredicted RBP10.32□□□□□ -0.76
GGPS1-204ENST00000471812 TIPINQ9BVW5 301 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 STRA6Q9BX79 667 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 PARVGQ9HBI0 331 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 ODF2LQ9ULJ1 636 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 PCDHA7Q9UN72 937 aa10.32□□□□□ -0.76
GGPS1-204ENST00000471812 COL4A3Q01955 1670 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 ZMYM2Q9UBW7 1377 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 LACTBL1A8MY62 500 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 NRG2O14511 850 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-204ENST00000471812 SLC26A4O43511 780 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 NCK2O43639 380 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 N4BP1O75113 896 aaKnown RBP10.31□□□□□ -0.76
GGPS1-204ENST00000471812 TOM1L1O75674 476 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 URODP06132 367 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 KLRC2P26717 231 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 ADSSP30520 456 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 HOXD13P35453 343 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 STAT6P42226 847 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 UPP1Q16831 310 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 CEP57Q86XR8 500 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 HACE1Q8IYU2 909 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 LNX1Q8TBB1 728 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-204ENST00000471812 PPP2R3CQ969Q6 453 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 DHX58Q96C10 678 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 BICD1Q96G01 975 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 FBXL18Q96ME1 805 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 CLSTN3Q9BQT9 956 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 TCHPQ9BT92 498 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 COLEC11Q9BWP8 271 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 C17orf75Q9HAS0 396 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 RXFP1Q9HBX9 757 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 GDPD2Q9HCC8 539 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 KCND2Q9NZV8 630 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 CNTN3Q9P232 1028 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 KIAA1468Q9P260 1216 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 STK17AQ9UEE5 414 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 RBM19Q9Y4C8 960 aaKnown RBP10.31□□□□□ -0.76
GGPS1-204ENST00000471812 MORC2Q9Y6X9 1032 aaPredicted RBP10.31□□□□□ -0.76
GGPS1-204ENST00000471812 MUC6Q6W4X9 2439 aa10.31□□□□□ -0.76
GGPS1-204ENST00000471812 A0A0B4J269 797 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 TTC26A0AVF1 554 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 FRMD3A2A2Y4 597 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 C2CD4DB7Z1M9 353 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 LOC730098B7Z3J9 87 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 HNRNPDLO14979 420 aaKnown RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 TGM5O43548 720 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 PPP6R2O75170 966 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 TBCAO75347 108 aaKnown RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 TADA2AO75478 443 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 PRPF6O94906 941 aaKnown RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 YEATS4O95619 227 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 PIGRP01833 764 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 HSP90AA1P07900 732 aaKnown RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 NFICP08651 508 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 ACOT2P49753 483 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 NTHL1P78549 312 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 GTF2BQ00403 316 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 STRN3Q13033 797 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 CBX2Q14781 532 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 LILRA6Q6PI73 481 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 CRELD2Q6UXH1 353 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 ZPBP2Q6X784 338 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 ZNF720Q7Z2F6 126 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 RNF135Q8IUD6 432 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 MAP4K3Q8IVH8 894 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 CASP10Q92851 521 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 ZNF707Q96C28 371 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 ZNF396Q96N95 335 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 ACAP3Q96P50 834 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 CCDC94Q9BW85 323 aaPredicted RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 BLZF1Q9H2G9 400 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 ADAM7Q9H2U9 754 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 MRPL17Q9NRX2 175 aaKnown RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 LARSQ9P2J5 1176 aaKnown RBP10.3□□□□□ -0.76
GGPS1-204ENST00000471812 LIMD1Q9UGP4 676 aa10.3□□□□□ -0.76
GGPS1-204ENST00000471812 GOLGA8IPA6NC78 632 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 GOLGA8JA6NMD2 632 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 PI4K2BG5E9Z4 385 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms