RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 EIF4HQ15056 248 aaKnown RBP7.89□□□□□ -1.15
SMC5-202ENST00000471372 TAF5Q15542 800 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 MZT2AQ6P582 158 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 CLEC14AQ86T13 490 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 AGBL5Q8NDL9 886 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 SKA1Q96BD8 255 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 TRIM43Q96BQ3 446 aaPredicted RBP7.89□□□□□ -1.15
SMC5-202ENST00000471372 PAGR1Q9BTK6 254 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 SLAMF7Q9NQ25 335 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 DACT1Q9NYF0 836 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 SRRDQ9UH36 339 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 MED16Q9Y2X0 877 aa7.89□□□□□ -1.15
SMC5-202ENST00000471372 KIAA1324LA8MWY0 1029 aaPredicted RBP7.88□□□□□ -1.15
SMC5-202ENST00000471372 BTN3A1O00481 513 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 DAPK3O43293 454 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 EPB41L2O43491 1005 aaKnown RBP7.88□□□□□ -1.15
SMC5-202ENST00000471372 RHOBTB3O94955 611 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 MT-ND5P03915 603 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 ANXA2P07355 339 aaKnown RBP7.88□□□□□ -1.15
SMC5-202ENST00000471372 SBK3P0C264 359 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 CRHR1P34998 444 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 PTPN7P35236 360 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 AFMP43652 599 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 PHKA1P46020 1223 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 KCNJ5P48544 419 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 WNT3AP56704 352 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 SLC13A2Q13183 592 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 DDX10Q13206 875 aaKnown RBP7.88□□□□□ -1.15
SMC5-202ENST00000471372 EMC10Q5UCC4 262 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 ZNF783Q6ZMS7 281 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 MICU3Q86XE3 530 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 FANCBQ8NB91 859 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 SPATA6Q9NWH7 488 aaPredicted RBP7.88□□□□□ -1.15
SMC5-202ENST00000471372 SCINQ9Y6U3 715 aa7.88□□□□□ -1.15
SMC5-202ENST00000471372 IRS2Q9Y4H2 1338 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 A0A1B0GVC2 190 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 C2orf78A6NCI8 922 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 AQP12BA6NM10 295 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 TRIM38O00635 465 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 TBC1D4O60343 1298 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 ABHD16AO95870 558 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 TBX2Q13207 712 aaPredicted RBP7.87□□□□□ -1.15
SMC5-202ENST00000471372 ADAM15Q13444 863 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 PRAMEF14Q5SWL7 426 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 RRAGBQ5VZM2 374 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 JMJD6Q6NYC1 403 aaPredicted RBP7.87□□□□□ -1.15
SMC5-202ENST00000471372 BEND5Q7L4P6 421 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 MAATS1Q7Z4T9 603 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 ZDHHC14Q8IZN3 488 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 FLAD1Q8NFF5 587 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 CASKIN2Q8WXE0 1202 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 C11orf84Q9BUA3 381 aaPredicted RBP7.87□□□□□ -1.15
SMC5-202ENST00000471372 SERHLQ9NQF3 203 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 GJD2Q9UKL4 321 aa7.87□□□□□ -1.15
SMC5-202ENST00000471372 RRN3P2A6NIE6 340 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 PRSS29PA6NIE9 313 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 J3KRW8 73 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 EYA2O00167 538 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 EIF3FO00303 357 aaPredicted RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 NDST3O95803 873 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 GASTP01350 101 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 DDIT3P35638 169 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 ALDH1A3P47895 512 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 TOP3AQ13472 1001 aaPredicted RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 SMAD4Q13485 552 aaKnown RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 OLFML2BQ68BL8 750 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 UNC13DQ70J99 1090 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 B3GNT8Q7Z7M8 397 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 PCSK9Q8NBP7 692 aaKnown RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 MDM1Q8TC05 714 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 IPO4Q8TEX9 1081 aaKnown RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 LIN37Q96GY3 246 aaPredicted RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 NOX5Q96PH1 765 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 GDF15Q99988 308 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 SIDT1Q9NXL6 827 aaKnown RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 PDP2Q9P2J9 529 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 LAS1LQ9Y4W2 734 aaKnown RBP7.86□□□□□ -1.15
SMC5-202ENST00000471372 RPS6KL1Q9Y6S9 549 aa7.86□□□□□ -1.15
SMC5-202ENST00000471372 TMEM233B4DJY2 109 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 SYT5O00445 386 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 PODXLO00592 558 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 GRM6O15303 877 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 THAP12O43422 761 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 HMGCRP04035 888 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 MYL4P12829 197 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 IL1R1P14778 569 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 SERPINF1P36955 418 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 MLLT6P55198 1093 aaPredicted RBP7.85□□□□□ -1.15
SMC5-202ENST00000471372 ARL4CP56559 192 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 NOMO3P69849 1222 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 CTBP1Q13363 440 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 SPARCL1Q14515 664 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 CCDC93Q567U6 631 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 TRIM68Q6AZZ1 485 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 CATSPERGQ6ZRH7 1159 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 RFX8Q6ZV50 586 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 LARP4Q71RC2 724 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMC5-202ENST00000471372 IRF2BP1Q8IU81 584 aa7.85□□□□□ -1.15
SMC5-202ENST00000471372 PLXDC1Q8IUK5 500 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms