RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PARNO95453 639 aaKnown RBP18.85■□□□□ 0.61
HSPG2-208ENST00000471322 SOX5P35711 763 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 MATR3P43243 847 aaKnown RBP eCLIP18.85■□□□□ 0.61
HSPG2-208ENST00000471322 CLDN10P78369 228 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 CYP27A1Q02318 531 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 ARID5AQ03989 594 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 PLEKHG4Q58EX7 1191 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 CNKSR3Q6P9H4 555 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 FAM81BQ96LP2 452 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 FNBP1Q96RU3 617 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 GUCA1BQ9UMX6 200 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 A0A0U1RQJ8 604 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 CTAGE9A4FU28 777 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 F8VZ95 297 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 DYNC1I1O14576 645 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 ZNF263O14978 683 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 PJA2O43164 708 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 URI1O94763 535 aaPredicted RBP18.85■□□□□ 0.61
HSPG2-208ENST00000471322 PRKCBP05771 671 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 PTENP60484 403 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 DRAP1Q14919 205 aaPredicted RBP18.85■□□□□ 0.61
HSPG2-208ENST00000471322 NLRP7Q8WX94 980 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 ATRIPQ8WXE1 791 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 SLC4A7Q9Y6M7 1214 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 ACKR2O00590 384 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 PHKA2P46019 1235 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 GPC3P51654 580 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 NFX1Q12986 1120 aaKnown RBP18.84■□□□□ 0.61
HSPG2-208ENST00000471322 RASIP1Q5U651 963 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 PHLDB3Q6NSJ2 640 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 GJB7Q6PEY0 223 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 FBXL13Q8NEE6 735 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 SEPT8Q92599 483 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 NLRP4Q96MN2 994 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 ACO2Q99798 780 aaKnown RBP18.84■□□□□ 0.61
HSPG2-208ENST00000471322 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.84■□□□□ 0.61
HSPG2-208ENST00000471322 IRX2Q9BZI1 471 aaPredicted RBP18.84■□□□□ 0.61
HSPG2-208ENST00000471322 ADAMTS10Q9H324 1103 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 FZD8Q9H461 694 aa18.84■□□□□ 0.61
HSPG2-208ENST00000471322 UBE2TQ9NPD8 197 aaPredicted RBP18.84■□□□□ 0.61
HSPG2-208ENST00000471322 NOC2LQ9Y3T9 749 aaKnown RBP18.84■□□□□ 0.61
HSPG2-208ENST00000471322 ZC3H11AO75152 810 aaKnown RBP eCLIP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 SLU7O95391 586 aaKnown RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 RPLP2P05387 115 aaKnown RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 DLATP10515 647 aaKnown RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 FGFR4P22455 802 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 DEFB103AP81534 67 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 PTK2Q05397 1052 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 GFPT1Q06210 699 aaPredicted RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 IKBKEQ14164 716 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 TSHZ1Q6ZSZ6 1077 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 IFNLR1Q8IU57 520 aaPredicted RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 TCHPQ9BT92 498 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 MTIF3Q9H2K0 278 aaKnown RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 PRMT7Q9NVM4 692 aaPredicted RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 RBAKQ9NYW8 714 aaPredicted RBP18.83■□□□□ 0.61
HSPG2-208ENST00000471322 ANKFY1Q9P2R3 1169 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 PADI3Q9ULW8 664 aa18.83■□□□□ 0.61
HSPG2-208ENST00000471322 COL6A3P12111 3177 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 A0A087WZ62 844 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 CTIFO43310 598 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 IBSPP21815 317 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 RABGGTBP53611 331 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 CRYBB1P53674 252 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 AP3M2P53677 418 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 MFAP3P55082 362 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 WDR5P61964 334 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 CDC42EP1Q00587 391 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 SURF1Q15526 300 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 LRIT3Q3SXY7 679 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 FAM117BQ6P1L5 589 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 SV2AQ7L0J3 742 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 SLC35F6Q8N357 371 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 RNF10Q8N5U6 811 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 SECISBP2LQ93073 1101 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 ZBTB45Q96K62 511 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 NAPGQ99747 312 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 FDXACB1Q9BRP7 624 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 LACRTQ9GZZ8 138 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 RAB20Q9NX57 234 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 ADAMTS1Q9UHI8 967 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 AJAP1Q9UKB5 411 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 INO80B-WBP1J3KQ70 363 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 ATP2A2P16615 1042 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 PBX2P40425 430 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 ACOT2P49753 483 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 MCL1Q07820 350 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 PAK2Q13177 524 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 PRPF4BQ13523 1007 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 BMS1Q14692 1282 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 FAM187BQ17R55 369 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 CRELD2Q6UXH1 353 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 ENOSF1Q7L5Y1 443 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 ZNF571Q7Z3V5 609 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
HSPG2-208ENST00000471322 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 INO80BQ9C086 356 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-208ENST00000471322 ATP8B3O60423 1300 aa18.81■□□□□ 0.6
HSPG2-208ENST00000471322 RCCD1A6NED2 376 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms