RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 PTPRSQ13332 1948 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 ADCY5O95622 1261 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 HLA-DRAP01903 254 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 THP07101 528 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 CDC25BP30305 580 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 PIK3CAP42336 1068 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 KCNJ6P48051 423 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 GATMP50440 423 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
FN1-217ENST00000471193 KCNMA1Q12791 1236 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 CETN1Q12798 172 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 SYCP1Q15431 976 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 EXOC3L4Q17RC7 722 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 NOMO2Q5JPE7 1267 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 GBP6Q6ZN66 633 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 VSTM4Q8IW00 320 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 TMEM130Q8N3G9 435 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 FBXL13Q8NEE6 735 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 LMO3Q8TAP4 145 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 URGCPQ8TCY9 931 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 HERVK_113Q902F9 699 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 TOP1MTQ969P6 601 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 CASD1Q96PB1 797 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 INTS2Q9H0H0 1204 aaKnown RBP12.54□□□□□ -0.4
FN1-217ENST00000471193 RC3H2Q9HBD1 1191 aaKnown RBP12.54□□□□□ -0.4
FN1-217ENST00000471193 DPP3Q9NY33 737 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 SIX4Q9UIU6 781 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 ITIH6Q6UXX5 1313 aa12.54□□□□□ -0.4
FN1-217ENST00000471193 ZBBXA8MT70 800 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 DGKIO75912 1065 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 POMCP01189 267 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 ITGB3P05106 788 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 LRPAP1P30533 357 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 MAGEA10P43363 369 aaPredicted RBP12.53□□□□□ -0.4
FN1-217ENST00000471193 KLK7P49862 253 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 NCOA4Q13772 614 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 TRIM65Q6PJ69 517 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 ABI1Q8IZP0 508 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 MRPL9Q9BYD2 267 aaKnown RBP12.53□□□□□ -0.4
FN1-217ENST00000471193 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 RAB20Q9NX57 234 aa12.53□□□□□ -0.4
FN1-217ENST00000471193 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
FN1-217ENST00000471193 ANO9A1A5B4 782 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 ZC3H11AO75152 810 aaKnown RBP eCLIP12.52□□□□□ -0.41
FN1-217ENST00000471193 PHACTR2O75167 634 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 LRRN2O75325 713 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 UPP2O95045 317 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 SLC9A1P19634 815 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 PON1P27169 355 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
FN1-217ENST00000471193 DSC1Q08554 894 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 TUSC3Q13454 348 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 RASIP1Q5U651 963 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 C9orf57Q5W0N0 161 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 SCARA3Q6AZY7 606 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 DPY19L2P1Q6NXN4 242 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.52□□□□□ -0.41
FN1-217ENST00000471193 TMCO2Q7Z6W1 182 aaPredicted RBP12.52□□□□□ -0.41
FN1-217ENST00000471193 LRRC43Q8N309 656 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.41
FN1-217ENST00000471193 SLC9A7Q96T83 725 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 LSM14BQ9BX40 385 aaKnown RBP12.52□□□□□ -0.41
FN1-217ENST00000471193 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 GANQ9H2C0 597 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 MTIF3Q9H2K0 278 aaKnown RBP12.52□□□□□ -0.41
FN1-217ENST00000471193 SIX2Q9NPC8 291 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.41
FN1-217ENST00000471193 FNDC1Q4ZHG4 1894 aaPredicted RBP12.51□□□□□ -0.41
FN1-217ENST00000471193 TDRD15B5MCY1 1934 aaKnown RBP12.51□□□□□ -0.41
FN1-217ENST00000471193 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 PIRO00625 290 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 PPEF2O14830 753 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 EPHB6O15197 1021 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 B4GALT3O60512 393 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
FN1-217ENST00000471193 ASS1P00966 412 aaKnown RBP12.51□□□□□ -0.41
FN1-217ENST00000471193 CST3P01034 146 aaPredicted RBP12.51□□□□□ -0.41
FN1-217ENST00000471193 KRT19P08727 400 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 ATICP31939 592 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 RGS19P49795 217 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 MYL6P60660 151 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 NOP14P78316 857 aaKnown RBP12.51□□□□□ -0.41
FN1-217ENST00000471193 RBP5P82980 135 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 APBA1Q02410 837 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 TRPC3Q13507 836 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 ZNF699Q32M78 642 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 TMC6Q7Z403 805 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 LRRC52Q8N7C0 313 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 TAF4BQ92750 862 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 ZNF560Q96MR9 790 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 UROC1Q96N76 676 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 IMPG2Q9BZV3 1241 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms