RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NACC1Q96RE7 527 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 ADPGKQ9BRR6 497 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 POLR3CQ9BUI4 534 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-206ENST00000471037 FAM13BQ9NYF5 915 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 MTRRQ9UBK8 725 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 FBXO4Q9UKT5 387 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 KCNH3Q9ULD8 1083 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 OTOGLQ3ZCN5 2332 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 DNAH14Q0VDD8 3507 aa9.95□□□□□ -0.82
SF3A1-206ENST00000471037 VWA8A3KMH1 1905 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 PATJQ8NI35 1801 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 COL4A3Q01955 1670 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 A0A087WWV3 80 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 FAM237AA0A1B0GTK4 181 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 SPTLC1O15269 473 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 CCL16O15467 120 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 SLC26A4O43511 780 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 KINO60870 393 aaKnown RBP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 LRRN2O75325 713 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 MED24O75448 989 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 EDN1P05305 212 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 PRKCBP05771 671 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 OR1D2P34982 312 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 TXLNAP40222 546 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 NAMPTP43490 491 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 GRIN1Q05586 938 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 SNW1Q13573 536 aaKnown RBP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 PDIA5Q14554 519 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 PUM1Q14671 1186 aaKnown RBP eCLIP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 IL17AQ16552 155 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 DCAF4L1Q3SXM0 396 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 PABPC1LQ4VXU2 614 aaKnown RBP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 SLC44A4Q53GD3 710 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 RESP18Q5W5W9 173 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 SHC4Q6S5L8 630 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 CCDC73Q6ZRK6 1079 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 MAEAQ7L5Y9 396 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 KIAA2013Q8IYS2 634 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 IGSF22Q8N9C0 903 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 FSIP1Q8NA03 581 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 ST13P5Q8NFI4 369 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 ITFG1Q8TB96 612 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 CLIC6Q96NY7 704 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 PPP1R10Q96QC0 940 aaKnown RBP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 BCO2Q9BYV7 579 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 CXCL16Q9H2A7 254 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 LTB4R2Q9NPC1 389 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 AVENQ9NQS1 362 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 DLL3Q9NYJ7 618 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 DNMT3BQ9UBC3 853 aaKnown RBP9.94□□□□□ -0.82
SF3A1-206ENST00000471037 POLIQ9UNA4 740 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 BACE2Q9Y5Z0 518 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
SF3A1-206ENST00000471037 LAMTOR5O43504 91 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 ECI2O75521 394 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 CYP11B2P19099 503 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 MUTP22033 750 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 RPA1P27694 616 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 FAM160A1Q05DH4 1040 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 PPP2R5AQ15172 486 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 TMEM132AQ24JP5 1023 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 KLHL40Q2TBA0 621 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 EEF1DP3Q658K8 133 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 PADI6Q6TGC4 694 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 CD300LGQ6UXG3 332 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 DGLUCYQ7Z3D6 616 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 ZBTB44Q8NCP5 570 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 NELL1Q92832 810 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 CLDN23Q96B33 292 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
SF3A1-206ENST00000471037 UROC1Q96N76 676 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 HINFPQ9BQA5 517 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 KXD1Q9BQD3 176 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 PYM1Q9BRP8 204 aaKnown RBP9.93□□□□□ -0.82
SF3A1-206ENST00000471037 CCSER1Q9C0I3 900 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 HCFC1R1Q9NWW0 138 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 GDE1Q9NZC3 331 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 LRWD1Q9UFC0 647 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 HPSEQ9Y251 543 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 PCDHGA2Q9Y5H1 932 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 CDY1Q9Y6F8 540 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 MIA3Q5JRA6 1907 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 DMXL1Q9Y485 3027 aa9.93□□□□□ -0.82
SF3A1-206ENST00000471037 A0A1B0GVL5 298 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 MED19A0JLT2 244 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-206ENST00000471037 ARHGEF37A1IGU5 675 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 ARHGEF35A5YM69 484 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 TRAPPC3O43617 180 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 TRAK2O60296 914 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 B3GAT3O94766 335 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 PFKFB1P16118 471 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 IGFBP6P24592 240 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-206ENST00000471037 UBA7P41226 1012 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 RPS9P46781 194 aaKnown RBP9.92□□□□□ -0.82
SF3A1-206ENST00000471037 CLCNKBP51801 687 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 EFNA5P52803 228 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 UBXN2BQ14CS0 331 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 UPP1Q16831 310 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 GLRA4Q5JXX5 417 aa9.92□□□□□ -0.82
SF3A1-206ENST00000471037 HAUS3Q68CZ6 603 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms