RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PCDHGA12O60330 932 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 FAM20BO75063 409 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PPFIA4O75335 1185 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 MAKP20794 623 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PTGS2P35354 604 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 SLC6A9P48067 706 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 SLC16A1P53985 500 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 ABHD18Q0P651 414 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 FHL2Q14192 279 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 ATXN7L2Q5T6C5 722 aaPredicted RBP5.4□□□□□ -1.54
COL9A1-206ENST00000470652 FNDC7Q5VTL7 733 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PNMA8AQ86V59 439 aaPredicted RBP5.4□□□□□ -1.54
COL9A1-206ENST00000470652 ZNF276Q8N554 614 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 OR10H5Q8NGA6 315 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 SLC35B2Q8TB61 432 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 ZNF483Q8TF39 744 aaPredicted RBP5.4□□□□□ -1.54
COL9A1-206ENST00000470652 NRG4Q8WWG1 115 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 STON2Q8WXE9 905 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 HAS1Q92839 578 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 GPATCH3Q96I76 525 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 C11orf21Q9P2W6 132 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 AJAP1Q9UKB5 411 aaPredicted RBP5.4□□□□□ -1.54
COL9A1-206ENST00000470652 SIK3Q9Y2K2 1263 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PCDHGA9Q9Y5G4 932 aaKnown RBP5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PCDHGA8Q9Y5G5 932 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PCDHGA7Q9Y5G6 932 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PCDHGA6Q9Y5G7 932 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 PCDHGA3Q9Y5H0 932 aa5.4□□□□□ -1.54
COL9A1-206ENST00000470652 MAST1Q9Y2H9 1570 aa5.4□□□□□ -1.55
COL9A1-206ENST00000470652 CFAP65Q6ZU64 1925 aaKnown RBP5.4□□□□□ -1.55
COL9A1-206ENST00000470652 KIAA1107Q9UPP5 1409 aa5.4□□□□□ -1.55
COL9A1-206ENST00000470652 PLEKHH2Q8IVE3 1493 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 ZMYM4Q5VZL5 1548 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 FZD9O00144 591 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 RAP2AP10114 183 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 C5AR1P21730 350 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 CCND1P24385 295 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 APOBEC3AP31941 199 aaPredicted RBP5.39□□□□□ -1.55
COL9A1-206ENST00000470652 NHLH2Q02577 135 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 PCBP2Q15366 365 aaKnown RBP eCLIP5.39□□□□□ -1.55
COL9A1-206ENST00000470652 CSRP2Q16527 193 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 PTPN21Q16825 1174 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 AFMIDQ63HM1 303 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 OTUD7BQ6GQQ9 843 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 GDF7Q7Z4P5 450 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 SYT12Q8IV01 421 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 DRC7Q8IY82 874 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 FBXO18Q8NFZ0 1043 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 OR2I1PQ8NGU4 316 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 CCHCR1Q8TD31 782 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 DPF2Q92785 391 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 HDAC10Q969S8 669 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 MRI1Q9BV20 369 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 SLC46A2Q9BY10 475 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 ASPSCR1Q9BZE9 553 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 MMRN2Q9H8L6 949 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 SLC2A4RGQ9NR83 387 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 FAM30AQ9NZY2 134 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 TUBD1Q9UJT1 453 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 REXO2Q9Y3B8 237 aaKnown RBP5.39□□□□□ -1.55
COL9A1-206ENST00000470652 SPAG9O60271 1321 aaKnown RBP5.39□□□□□ -1.55
COL9A1-206ENST00000470652 TNKSO95271 1327 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 CEP152O94986 1710 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 NAIPQ13075 1403 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 ZNF518AQ6AHZ1 1483 aa5.39□□□□□ -1.55
COL9A1-206ENST00000470652 PLXNC1O60486 1568 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 MROH1Q8NDA8 1641 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 DRGXA6NNA5 263 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 LEFTY2O00292 366 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 GPR32O75388 356 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 ATP5JP18859 108 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 ANAPC15P60006 121 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 IGFL4Q6B9Z1 124 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 RHOT1Q8IXI2 618 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 SYNE4Q8N205 404 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 RNF169Q8NCN4 708 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 TEKT5Q96M29 485 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 LDAHQ9H6V9 325 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 TRPM5Q9NZQ8 1165 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 FZD1Q9UP38 647 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 PNPLA7Q6ZV29 1317 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 KIF15Q9NS87 1388 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 NCOA1Q15788 1441 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 ADGRL2O95490 1459 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 SHANK2Q9UPX8 1470 aa5.38□□□□□ -1.55
COL9A1-206ENST00000470652 hCG_2014768A0A024R1R8 64 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 GAGE12BA1L429 117 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 GAGE12HA6NDE8 117 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 AHRRA9YTQ3 701 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 WNT10BO00744 389 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 ADH4P08319 380 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 NCLP19338 710 aaKnown RBP5.37□□□□□ -1.55
COL9A1-206ENST00000470652 DDCP20711 480 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 FPR1P21462 350 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 ALDH1A3P47895 512 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 EXOSC10Q01780 885 aaKnown RBP5.37□□□□□ -1.55
COL9A1-206ENST00000470652 ATP2B3Q16720 1220 aa5.37□□□□□ -1.55
COL9A1-206ENST00000470652 BRDTQ58F21 947 aaPredicted RBP5.37□□□□□ -1.55
COL9A1-206ENST00000470652 LENG9Q96B70 501 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms