RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ZDHHC7Q9NXF8 308 aa15.34■□□□□ 0.05
COMMD3-208ENST00000470045 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
COMMD3-208ENST00000470045 MTRRQ9UBK8 725 aa15.34■□□□□ 0.05
COMMD3-208ENST00000470045 FBXW11Q9UKB1 542 aa15.34■□□□□ 0.05
COMMD3-208ENST00000470045 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
COMMD3-208ENST00000470045 STYXL1Q9Y6J8 313 aa15.34■□□□□ 0.05
COMMD3-208ENST00000470045 DOCK8Q8NF50 2099 aa15.34■□□□□ 0.05
COMMD3-208ENST00000470045 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 TRAPPC3O43617 180 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 CUTAO60888 179 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 RFPL2O75678 378 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 GAP43P17677 238 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 TKTP29401 623 aaKnown RBP15.33■□□□□ 0.04
COMMD3-208ENST00000470045 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
COMMD3-208ENST00000470045 BRCC3P46736 316 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 ENOX2Q16206 610 aaKnown RBP15.33■□□□□ 0.04
COMMD3-208ENST00000470045 PTPN21Q16825 1174 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 ZBTB41Q5SVQ8 909 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 AXDND1Q5T1B0 1012 aaPredicted RBP15.33■□□□□ 0.04
COMMD3-208ENST00000470045 ATL3Q6DD88 541 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 CCDC149Q6ZUS6 474 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 GLYCTKQ8IVS8 523 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 ZDHHC14Q8IZN3 488 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 KREMEN2Q8NCW0 462 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 TSPAN18Q96SJ8 248 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 TUBGCP4Q9UGJ1 667 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 CPSF3Q9UKF6 684 aaKnown RBP15.33■□□□□ 0.04
COMMD3-208ENST00000470045 BACE2Q9Y5Z0 518 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 TSC2P49815 1807 aa15.33■□□□□ 0.04
COMMD3-208ENST00000470045 MYO10Q9HD67 2058 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 CCDC195A0A1B0GUA6 201 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 ANKRD63C9JTQ0 380 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 ADAM12O43184 909 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 ZMYND10O75800 440 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 SPATA31D3P0C874 917 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 SP100P23497 879 aaPredicted RBP15.32■□□□□ 0.04
COMMD3-208ENST00000470045 LRPAP1P30533 357 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 ZXDAP98168 799 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 PPP2R3AQ06190 1150 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 RAB33AQ14088 237 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
COMMD3-208ENST00000470045 SHC4Q6S5L8 630 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 SPATA31D4Q6ZUB0 917 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 ANKS3Q6ZW76 656 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 PDILTQ8N807 584 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 TDRD5Q8NAT2 981 aaKnown RBP15.32■□□□□ 0.04
COMMD3-208ENST00000470045 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
COMMD3-208ENST00000470045 SUSD3Q96L08 255 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 MSTO1Q9BUK6 570 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 TNMDQ9H2S6 317 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 CUEDC2Q9H467 287 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 WDR6Q9NNW5 1121 aaKnown RBP15.32■□□□□ 0.04
COMMD3-208ENST00000470045 TSHZ2Q9NRE2 1034 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 KBTBD4Q9NVX7 518 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 UBQLN1Q9UMX0 589 aaKnown RBP15.32■□□□□ 0.04
COMMD3-208ENST00000470045 ZNF318Q5VUA4 2279 aa15.32■□□□□ 0.04
COMMD3-208ENST00000470045 TISP43B9A030 160 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 I3L4J1 428 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 SYN3O14994 580 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 TBC1D4O60343 1298 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 CYP3A5P20815 502 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 HOXA9P31269 272 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 SLFN12LQ6IEE8 588 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 RSPO2Q6UXX9 243 aaPredicted RBP15.31■□□□□ 0.04
COMMD3-208ENST00000470045 CD302Q8IX05 232 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 PLCD3Q8N3E9 789 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 PANK2Q9BZ23 570 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 RPF1Q9H9Y2 349 aaKnown RBP15.31■□□□□ 0.04
COMMD3-208ENST00000470045 CLUHO75153 1309 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 DOCK6Q96HP0 2047 aa15.31■□□□□ 0.04
COMMD3-208ENST00000470045 LACTBL1A8MY62 500 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 GALR2O43603 387 aaPredicted RBP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 ADSSP30520 456 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 OR1D2P34982 312 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 AARSP49588 968 aaKnown RBP eCLIP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 CASP5P51878 434 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 POU5F1Q01860 360 aaKnown RBP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 SPAG1Q07617 926 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 ALCAMQ13740 583 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 MRPL58Q14197 206 aaKnown RBP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 VARS2Q5ST30 1063 aaKnown RBP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 L1TD1Q5T7N2 865 aaKnown RBP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 SLC8B1Q6J4K2 584 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 CNNM4Q6P4Q7 775 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 TRIM67Q6ZTA4 783 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 OTOP3Q7RTS5 596 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 BMP8AQ7Z5Y6 402 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 KMT2EQ8IZD2 1858 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 SMG7Q92540 1137 aaKnown RBP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 KIF12Q96FN5 646 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 IKZF4Q9H2S9 585 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 MRPL44Q9H9J2 332 aaKnown RBP15.3■□□□□ 0.04
COMMD3-208ENST00000470045 NUB1Q9Y5A7 615 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 CDY1Q9Y6F8 540 aa15.3■□□□□ 0.04
COMMD3-208ENST00000470045 NOTCH4Q99466 2003 aa15.29■□□□□ 0.04
COMMD3-208ENST00000470045 XPOTO43592 962 aaKnown RBP15.29■□□□□ 0.04
COMMD3-208ENST00000470045 N4BP1O75113 896 aaKnown RBP15.29■□□□□ 0.04
COMMD3-208ENST00000470045 POU2F2P09086 479 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms