RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 TARBP2Q15633 366 aaKnown RBP12.54□□□□□ -0.4
COMMD2-202ENST00000469896 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 TXNDC11Q6PKC3 985 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 SRGAP1Q7Z6B7 1085 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 HDDC3Q8N4P3 179 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 ZSCAN18Q8TBC5 510 aaPredicted RBP12.54□□□□□ -0.4
COMMD2-202ENST00000469896 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 CCDC51Q96ER9 411 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 NUSAP1Q9BXS6 441 aaKnown RBP12.54□□□□□ -0.4
COMMD2-202ENST00000469896 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
COMMD2-202ENST00000469896 IFT122Q9HBG6 1241 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 DISC1Q9NRI5 854 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 SALL3Q9BXA9 1300 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 TICRRQ7Z2Z1 1910 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
COMMD2-202ENST00000469896 COL4A2P08572 1712 aa12.54□□□□□ -0.4
COMMD2-202ENST00000469896 WDR81Q562E7 1941 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 IGKV6-21A0A0C4DH24 114 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 CCDC194A0A1B0GVG4 234 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 HEPACAM2A8MVW5 462 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 ATXN7O15265 892 aaPredicted RBP12.53□□□□□ -0.4
COMMD2-202ENST00000469896 SDSP20132 328 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 MAPK8P45983 427 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 ADCY7P51828 1080 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 WDR44Q5JSH3 913 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 IQCEQ6IPM2 695 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 CWC27Q6UX04 472 aaKnown RBP12.53□□□□□ -0.4
COMMD2-202ENST00000469896 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
COMMD2-202ENST00000469896 LEMD2Q8NC56 503 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 LSM14AQ8ND56 463 aaKnown RBP12.53□□□□□ -0.4
COMMD2-202ENST00000469896 MDM1Q8TC05 714 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 HASPINQ8TF76 798 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 RABGGTAQ92696 567 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 TCEAL4Q96EI5 215 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 GPR88Q9GZN0 384 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 SLITRK6Q9H5Y7 841 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 DIAPH3Q9NSV4 1193 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 MIOSQ9NXC5 875 aa12.53□□□□□ -0.4
COMMD2-202ENST00000469896 EVLQ9UI08 416 aaPredicted RBP12.53□□□□□ -0.4
COMMD2-202ENST00000469896 PCNX2A6NKB5 2137 aa12.52□□□□□ -0.4
COMMD2-202ENST00000469896 ASCC3Q8N3C0 2202 aaKnown RBP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 URB1O60287 2271 aaKnown RBP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 IGLV3-22A0A075B6J6 115 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PATE3B3GLJ2 98 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 DCLK1O15075 740 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 MEFVO15553 781 aaPredicted RBP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PLEKHA8P1O95397 391 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 SFNP31947 248 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 ATXN3P54252 364 aaPredicted RBP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PDE1AP54750 535 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 NAPAP54920 295 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 FCHO2Q0JRZ9 810 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 GRSF1Q12849 480 aaKnown RBP eCLIP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 SEMA3BQ13214 749 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PTPAQ15257 358 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 TRIM61Q5EBN2 209 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 XKR3Q5GH77 459 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 NIFKQ9BYG3 293 aaKnown RBP12.52□□□□□ -0.41
COMMD2-202ENST00000469896 CLMPQ9H6B4 373 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 HES2Q9Y543 173 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 COL4A3BPQ9Y5P4 624 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 PIEZO2Q9H5I5 2752 aa12.52□□□□□ -0.41
COMMD2-202ENST00000469896 NOTCH4Q99466 2003 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 hCG_1642624A0A1W2PR95 340 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 CAPN9O14815 690 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 MAFO75444 373 aaPredicted RBP12.51□□□□□ -0.41
COMMD2-202ENST00000469896 APBB3O95704 486 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 AXLP30530 894 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 JAK3P52333 1124 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 TUSC3Q13454 348 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 ARHGAP29Q52LW3 1261 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 USP39Q53GS9 565 aaKnown RBP12.51□□□□□ -0.41
COMMD2-202ENST00000469896 PMS2CLQ68D20 193 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 CMTR1Q8N1G2 835 aaKnown RBP12.51□□□□□ -0.41
COMMD2-202ENST00000469896 PIGKQ92643 395 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 HHIPQ96QV1 700 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 TMEM209Q96SK2 561 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
COMMD2-202ENST00000469896 MTRRQ9UBK8 725 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 ZMYM2Q9UBW7 1377 aa12.51□□□□□ -0.41
COMMD2-202ENST00000469896 HIP1O00291 1037 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 NRG2O14511 850 aaPredicted RBP12.5□□□□□ -0.41
COMMD2-202ENST00000469896 KIF4AO95239 1232 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 SRGAP2CP0DJJ0 459 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms