RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 TIPINQ9BVW5 301 aa14.77□□□□□ -0.05
EFNA1-203ENST00000469878 UPF2Q9HAU5 1272 aaKnown RBP14.77□□□□□ -0.05
EFNA1-203ENST00000469878 DNMT3BQ9UBC3 853 aaKnown RBP14.77□□□□□ -0.05
EFNA1-203ENST00000469878 ANK1P16157 1881 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 HNRNPA1P09651 372 aaKnown RBP eCLIP14.76□□□□□ -0.05
EFNA1-203ENST00000469878 SRFP11831 508 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 GUCY2FP51841 1108 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 ARPP19P56211 112 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 MCL1Q07820 350 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 SLC5A9Q2M3M2 681 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 SPECC1Q5M775 1068 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 FAM173BQ6P4H8 233 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 PDXDC1Q6P996 788 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 USP49Q70CQ1 688 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 FGF13Q92913 245 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 SLC38A7Q9NVC3 462 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.76□□□□□ -0.052e-9■■■■■ 53.1
EFNA1-203ENST00000469878 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
EFNA1-203ENST00000469878 BACE2Q9Y5Z0 518 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 TSC2P49815 1807 aa14.76□□□□□ -0.05
EFNA1-203ENST00000469878 VPS37CA5D8V6 355 aaPredicted RBP14.75□□□□□ -0.05
EFNA1-203ENST00000469878 K7ENM7 598 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 FAM189A1O60320 539 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 TBC1D4O60343 1298 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 SEC24AO95486 1093 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 HOXA9P31269 272 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 MCM4P33991 863 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 MCM2P49736 904 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 CLCN5P51795 746 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 SMTNP53814 917 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 SLC39A4Q6P5W5 647 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 ZPBP2Q6X784 338 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 ANKS3Q6ZW76 656 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 HAUS6Q7Z4H7 955 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 BICD1Q96G01 975 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 AK8Q96MA6 479 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 FIZ1Q96SL8 496 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 KXD1Q9BQD3 176 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 IKZF4Q9H2S9 585 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 CDH7Q9ULB5 785 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 CLIC4Q9Y696 253 aa14.75□□□□□ -0.05
EFNA1-203ENST00000469878 TISP43B9A030 160 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 PPEF2O14830 753 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 CLDN3O15551 220 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 TRAPPC3O43617 180 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 NMT1P30419 496 aaKnown RBP14.74□□□□□ -0.05
EFNA1-203ENST00000469878 UBA7P41226 1012 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 MATR3P43243 847 aaKnown RBP eCLIP14.74□□□□□ -0.05
EFNA1-203ENST00000469878 CUL4AQ13619 759 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 PABPC1LQ4VXU2 614 aaKnown RBP14.74□□□□□ -0.05
EFNA1-203ENST00000469878 SLC8B1Q6J4K2 584 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 NPAS3Q8IXF0 933 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 MYCT1Q8N699 235 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 RAD54LQ92698 747 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 ZHX3Q9H4I2 956 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 TBC1D17Q9HA65 648 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 KCND2Q9NZV8 630 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 WNT16Q9UBV4 365 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 FBXL5Q9UKA1 691 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 ODF2LQ9ULJ1 636 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 TBX20Q9UMR3 447 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 NUB1Q9Y5A7 615 aa14.74□□□□□ -0.05
EFNA1-203ENST00000469878 TTC26A0AVF1 554 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 HNRNPDLO14979 420 aaKnown RBP14.73□□□□□ -0.05
EFNA1-203ENST00000469878 XYLBO75191 536 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 LRRN2O75325 713 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 ABLIM3O94929 683 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 FAM13AO94988 1023 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 CEBPBP17676 345 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 MARCKSP29966 332 aaPredicted RBP14.73□□□□□ -0.05
EFNA1-203ENST00000469878 ZNF131P52739 623 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 NUBP1P53384 320 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 GPC5P78333 572 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 MRPL58Q14197 206 aaKnown RBP14.73□□□□□ -0.05
EFNA1-203ENST00000469878 PTPAQ15257 358 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 ENOX2Q16206 610 aaKnown RBP14.73□□□□□ -0.05
EFNA1-203ENST00000469878 BRAPQ7Z569 592 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 CCDC105Q8IYK2 499 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 ZNF461Q8TAF7 563 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 DDX12PQ92771 950 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 KIF12Q96FN5 646 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 CALML4Q96GE6 196 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 EPSTI1Q96J88 318 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 SUSD3Q96L08 255 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 ARHGEF3Q9NR81 526 aa14.73□□□□□ -0.05
EFNA1-203ENST00000469878 LARSQ9P2J5 1176 aaKnown RBP14.73□□□□□ -0.05
EFNA1-203ENST00000469878 TIMM13Q9Y5L4 95 aaPredicted RBP14.73□□□□□ -0.05
EFNA1-203ENST00000469878 LACTBL1A8MY62 500 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 STK25O00506 426 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 SYN3O14994 580 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 GFRA3O60609 400 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 VNN2O95498 520 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 RHOP08100 348 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 POU2F2P09086 479 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 OR4Q2P0C623 313 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 RPL9P32969 192 aaKnown RBP14.72□□□□□ -0.05
EFNA1-203ENST00000469878 LONP1P36776 959 aaKnown RBP14.72□□□□□ -0.05
EFNA1-203ENST00000469878 LIG4P49917 911 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 RESTQ13127 1097 aa14.72□□□□□ -0.05
EFNA1-203ENST00000469878 UVSSAQ2YD98 709 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms