RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CEP120Q8N960 986 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 APPL2Q8NEU8 664 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 PHOX2BQ99453 314 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 POLD4Q9HCU8 107 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 NUB1Q9Y5A7 615 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 NUMBLQ9Y6R0 609 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 USP34Q70CQ2 3546 aa11.99□□□□□ -0.49
COL4A3-204ENST00000469504 ARHGEF37A1IGU5 675 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 CCL16O15467 120 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 XPOTO43592 962 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 NARSO43776 548 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 MICAL2O94851 1124 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 ABLIM3O94929 683 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 CFHP08603 1231 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 CLTAP09496 248 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 MYBP10242 640 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 ATF2P15336 505 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 CYP3A5P20815 502 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 TKTP29401 623 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 LONP1P36776 959 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 UBA7P41226 1012 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 NCKAP1LP55160 1127 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 OSTNP61366 133 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 MRPL58Q14197 206 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 ZRSR1Q15695 479 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 PABPC1LQ4VXU2 614 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 VARS2Q5ST30 1063 aaKnown RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 ZNF280DQ6N043 979 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 CD300LGQ6UXG3 332 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 RSPO2Q6UXX9 243 aaPredicted RBP11.98□□□□□ -0.49
COL4A3-204ENST00000469504 TCEAL8Q8IYN2 117 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 DTWD2Q8NBA8 298 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 C3orf58Q8NDZ4 430 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 RSAD2Q8WXG1 361 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 FGF13Q92913 245 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 BORCS6Q96GS4 357 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 SUSD3Q96L08 255 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 PNMA5Q96PV4 448 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 CXCL16Q9H2A7 254 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 SEMA4AQ9H3S1 761 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 GOLGA2P5Q9HBQ8 144 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 ARHGEF3Q9NR81 526 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 GDE1Q9NZC3 331 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 POLIQ9UNA4 740 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 DMDP11532 3685 aa11.98□□□□□ -0.49
COL4A3-204ENST00000469504 KRBA1A5PL33 1030 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 ZNF197O14709 1029 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 ADAM12O43184 909 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 TBC1D4O60343 1298 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 PIGRP01833 764 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 LRG1P02750 347 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 PDCP20941 246 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 LRPAP1P30533 357 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 BRCC3P46736 316 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 STARD6P59095 220 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 ROR1Q01973 937 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 PRKCQQ04759 706 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 SOX4Q06945 474 aaPredicted RBP11.97□□□□□ -0.49
COL4A3-204ENST00000469504 SLC10A6Q3KNW5 377 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 LARP1BQ659C4 914 aaKnown RBP11.97□□□□□ -0.49
COL4A3-204ENST00000469504 CD302Q8IX05 232 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 ELMOD1Q8N336 334 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 LEMD2Q8NC56 503 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 GPR152Q8TDT2 470 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 BICD1Q96G01 975 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 ZMAT2Q96NC0 199 aaKnown RBP11.97□□□□□ -0.49
COL4A3-204ENST00000469504 TBC1D17Q9HA65 648 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 PARVGQ9HBI0 331 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 FAM86C1Q9NVL1 165 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 ANKFY1Q9P2R3 1169 aa11.97□□□□□ -0.49
COL4A3-204ENST00000469504 UBQLN1Q9UMX0 589 aaKnown RBP11.97□□□□□ -0.49
COL4A3-204ENST00000469504 WDR27A2RRH5 827 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 SFI1A8K8P3 1242 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 STK25O00506 426 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 PRRG1O14668 218 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 ECI2O75521 394 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 PTPN2P17706 415 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 MARCKSP29966 332 aaPredicted RBP11.96□□□□□ -0.49
COL4A3-204ENST00000469504 MCM4P33991 863 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 MAGEA9P43362 315 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 LIG4P49917 911 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 ZNF131P52739 623 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.49
COL4A3-204ENST00000469504 PPP2R3AQ06190 1150 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 ANGPT1Q15389 498 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 HAUS6Q7Z4H7 955 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 FGF14Q92915 247 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 NKD2Q969F2 451 aaPredicted RBP11.96□□□□□ -0.49
COL4A3-204ENST00000469504 OSBPL6Q9BZF3 934 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 DNMT3BQ9UBC3 853 aaKnown RBP11.96□□□□□ -0.49
COL4A3-204ENST00000469504 AFF4Q9UHB7 1163 aaKnown RBP11.96□□□□□ -0.49
COL4A3-204ENST00000469504 CA14Q9ULX7 337 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 PCDHB8Q9UN66 801 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 MRPS23Q9Y3D9 190 aaKnown RBP11.96□□□□□ -0.49
COL4A3-204ENST00000469504 SIT1Q9Y3P8 196 aa11.96□□□□□ -0.49
COL4A3-204ENST00000469504 DOCK8Q8NF50 2099 aa11.96□□□□□ -0.5
COL4A3-204ENST00000469504 ZFHX2Q9C0A1 2572 aaPredicted RBP11.95□□□□□ -0.5
COL4A3-204ENST00000469504 TTC26A0AVF1 554 aa11.95□□□□□ -0.5
COL4A3-204ENST00000469504 PRR23AA6NEV1 266 aa11.95□□□□□ -0.5
COL4A3-204ENST00000469504 M0QZQ0 153 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms